RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 TK1P04183 234 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 HOXB5P09067 269 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 SNTB1Q13884 538 aaKnown RBP11.95□□□□□ -0.5
LDB3-204ENST00000372066 IAH1Q2TAA2 248 aaPredicted RBP11.95□□□□□ -0.5
LDB3-204ENST00000372066 ACSF3Q4G176 576 aaPredicted RBP11.95□□□□□ -0.5
LDB3-204ENST00000372066 FAM76BQ5HYJ3 339 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 SHEQ5VZ18 495 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 OR2T2Q6IF00 324 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 LIAT1Q6ZQX7 453 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 MOB1BQ7L9L4 216 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 LGI3Q8N145 548 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 BHLHE23Q8NDY6 225 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 OR1S1Q8NH92 325 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 REG4Q9BYZ8 158 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 NUP50Q9UKX7 468 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 ATP23Q9Y6H3 246 aa11.95□□□□□ -0.5
LDB3-204ENST00000372066 FAM221AA4D161 298 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 H0YIZ8 118 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 IGKV3-15P01624 115 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 ACAA1P09110 424 aaPredicted RBP11.94□□□□□ -0.5
LDB3-204ENST00000372066 ZP3P21754 424 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 KIR2DL2P43627 348 aaPredicted RBP11.94□□□□□ -0.5
LDB3-204ENST00000372066 IDH3GP51553 393 aaPredicted RBP11.94□□□□□ -0.5
LDB3-204ENST00000372066 FXYD4P59646 89 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 RAB32Q13637 225 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 PAN3Q58A45 887 aaKnown RBP11.94□□□□□ -0.5
LDB3-204ENST00000372066 GGNBP1Q5YKI7 109 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 BRICD5Q6PL45 260 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 GCNT2Q8N0V5 402 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 NEK7Q8TDX7 302 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 PLSCR4Q9NRQ2 329 aa11.94□□□□□ -0.5
LDB3-204ENST00000372066 ZNF629Q9UEG4 869 aaPredicted RBP11.94□□□□□ -0.5
LDB3-204ENST00000372066 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.93□□□□□ -0.5
LDB3-204ENST00000372066 DUXBA0A1W2PPF3 345 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 KRBOX1C9JBD0 128 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 LYZL6O75951 148 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 OR5AC1P0C628 307 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 AADACP22760 399 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 CA6P23280 308 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 KRTAP21-3Q3LHN1 58 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 ZNF880Q6PDB4 577 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 Q6ZPA2 131 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 FAM169BQ8N8A8 192 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 CNEP1R1Q8N9A8 125 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 C9orf106Q8NAJ2 232 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 SUMF2Q8NBJ7 301 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 SUN5Q8TC36 379 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 PCNPQ8WW12 178 aaKnown RBP11.93□□□□□ -0.5
LDB3-204ENST00000372066 CXorf58Q96LI9 332 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 FOXC2Q99958 501 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 ADAT1Q9BUB4 502 aaKnown RBP11.93□□□□□ -0.5
LDB3-204ENST00000372066 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 TMED3Q9Y3Q3 217 aa11.93□□□□□ -0.5
LDB3-204ENST00000372066 MBD3L4A6NDZ8 208 aaPredicted RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 MBD3L3A6NE82 208 aaPredicted RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 MBD3L5A6NJ08 208 aaPredicted RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 TUSC2O75896 110 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 UCP2P55851 309 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 P2RY6Q15077 328 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 PDCD1Q15116 288 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 EIF5AL1Q6IS14 154 aaKnown RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 FIP1L1Q6UN15 594 aaKnown RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 ZNF565Q8N9K5 539 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 OR5T2Q8NGG2 359 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 OR4A4PQ8NGN8 299 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 MBD3L2Q8NHZ7 208 aaPredicted RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 NINJ1Q92982 152 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 C18orf12Q96KH6 178 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 OR2J1Q9GZK6 312 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 PRR13Q9NZ81 148 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 OR5AC2Q9NZP5 309 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 PCDHB10Q9UN67 800 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 AMDHD2Q9Y303 409 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 A8MXK9 166 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 NPIPB11E5RHQ5 1161 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 GPR31O00270 319 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 DEGS1O15121 323 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 LILRA1O75019 489 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 DEDDO75618 318 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 FGF2P09038 288 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 IL32P24001 234 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 DUSP1P28562 367 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 S100GP29377 79 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 S100A10P60903 97 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 HLA-DRB3P79483 266 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 BEX5Q5H9J7 111 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 SPIN3Q5JUX0 258 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 TGIF2LYQ8IUE0 185 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 OR1J1Q8NGS3 322 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 SLC25A40Q8TBP6 338 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 MRPL30Q8TCC3 161 aaKnown RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 MRPL24Q96A35 216 aaKnown RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 MSI2Q96DH6 328 aaKnown RBP11.92□□□□□ -0.5
LDB3-204ENST00000372066 CABLES2Q9BTV7 478 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 BCL2L14Q9BZR8 327 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 CXXC4Q9H2H0 198 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 OR51B6Q9H340 312 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms