RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 DHODHQ02127 395 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 HMGN3Q15651 99 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 C12orf45Q8N5I9 185 aaPredicted RBP21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 DEFB108BQ8NET1 73 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 TOMM40LQ969M1 308 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 KIRREL1Q96J84 757 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 FYTTD1Q96QD9 318 aaKnown RBP21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 ZNF665Q9H7R5 613 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 TAF9BQ9HBM6 251 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 SLC23A1Q9UHI7 598 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 TRBV6-7A0A0A0MS04 114 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 TRAV39A0A0B4J263 110 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 IGHV1-69-2A0A0G2JMI3 117 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 C9orf170A2RU37 121 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 FAM172BPA6NC97 362 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 PI3P19957 117 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 VAMP1P23763 118 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 EIF2B2P49770 351 aaKnown RBP21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 FXYD4P59646 89 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 C11orf91Q3C1V1 193 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 C6orf183Q5T699 404 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 C5orf24Q7Z6I8 188 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 ZNRF1Q8ND25 227 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 FXYD6Q9H0Q3 95 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 DCAF16Q9NXF7 216 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 MAB21L2Q9Y586 359 aa21.97■■□□□ 1.11
ATPAF1-202ENST00000371937 NPIPB11E5RHQ5 1161 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 ANXA3P12429 323 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 GLIPR1P48060 266 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 TRAT1Q6PIZ9 186 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 SLC38A6Q8IZM9 456 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 IL1F10Q8WWZ1 152 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 CLEC4MQ9H2X3 399 aaPredicted RBP21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 MGAT4CQ9UBM8 478 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 PPIAL4EA0A075B759 164 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 PPIAL4DF5H284 164 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 TUSC2O75896 110 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 PPIAL4FP0DN26 164 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 LPCAT3Q6P1A2 487 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 ZNF788Q6ZQV5 615 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 UXS1Q8NBZ7 420 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 OR2AK2Q8NG84 335 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 TMEM230Q96A57 120 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 FAM234AQ9H0X4 552 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 PPIAL4AQ9Y536 164 aa21.96■■□□□ 1.11
ATPAF1-202ENST00000371937 DUS4LO95620 317 aaKnown RBP21.95■■□□□ 1.1
ATPAF1-202ENST00000371937 GYPAP02724 150 aa21.95■■□□□ 1.1
ATPAF1-202ENST00000371937 EDDM3AQ14507 147 aa21.95■■□□□ 1.1
ATPAF1-202ENST00000371937 PRR18Q8N4B5 295 aa21.95■■□□□ 1.1
ATPAF1-202ENST00000371937 LURAP1Q96LR2 239 aa21.95■■□□□ 1.1
ATPAF1-202ENST00000371937 PHB2Q99623 299 aa21.95■■□□□ 1.1
ATPAF1-202ENST00000371937 DNTTIP1Q9H147 329 aa21.95■■□□□ 1.1
ATPAF1-202ENST00000371937 HFEQ30201 348 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 ZFP69Q49AA0 526 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 MITD1Q8WV92 249 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 DMRTB1Q96MA1 342 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 GAFA1Q96PS6 74 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 ZNF436Q9C0F3 470 aaPredicted RBP21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 RAB1BQ9H0U4 201 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 NCOR1P1Q9H4R4 102 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 NKX6-3A6NJ46 265 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 CD34P28906 385 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 ABCA11PQ4W5N1 156 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 C11orf88Q6PI97 169 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 GALMQ96C23 342 aa21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 ZNF486Q96H40 463 aaPredicted RBP21.94■■□□□ 1.1
ATPAF1-202ENST00000371937 H1FOOQ8IZA3 346 aaPredicted RBP21.93■■□□□ 1.1
ATPAF1-202ENST00000371937 CCL13Q99616 98 aa21.93■■□□□ 1.1
ATPAF1-202ENST00000371937 RSRP1Q9BUV0 290 aa21.93■■□□□ 1.1
ATPAF1-202ENST00000371937 OPN4Q9UHM6 478 aa21.93■■□□□ 1.1
ATPAF1-202ENST00000371937 ODAMA1E959 279 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 C12orf77C9JDV5 145 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 SIGLEC5O15389 551 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 HSPA12AO43301 675 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 SFT2D2O95562 160 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 GZMHP20718 246 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 ERP29P30040 261 aaKnown RBP21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 P2RX3P56373 397 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 C11orf71Q6IPW1 123 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 MEX3BQ6ZN04 569 aaKnown RBP21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 DTX2Q86UW9 622 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 TPRX1Q8N7U7 411 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 ZNF565Q8N9K5 539 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 MRGPRDQ8TDS7 321 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 OR2W1Q9Y3N9 320 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 A6NNC1 897 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 GOSR1O95249 250 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 CD8AP01732 235 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 DANCRP0C864 163 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 IL2RGP31785 369 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 CLEC18BQ6UXF7 455 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 SGPP2Q8IWX5 399 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 CASTOR1Q8WTX7 329 aa21.92■■□□□ 1.1
ATPAF1-202ENST00000371937 ZNF462Q96JM2 2506 aa21.91■■□□□ 1.1
ATPAF1-202ENST00000371937 DSCAMO60469 2012 aa21.91■■□□□ 1.1
ATPAF1-202ENST00000371937 SLC22A5O76082 557 aa21.91■■□□□ 1.1
ATPAF1-202ENST00000371937 PIGPP57054 158 aa21.91■■□□□ 1.1
ATPAF1-202ENST00000371937 SUPT4H1P63272 117 aaKnown RBP21.91■■□□□ 1.1
ATPAF1-202ENST00000371937 KCNJ8Q15842 424 aa21.91■■□□□ 1.1
ATPAF1-202ENST00000371937 OR13A1Q8NGR1 328 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms