RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 EID2Q8N6I1 236 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 TPRX1Q8N7U7 411 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 OR5M3Q8NGP4 307 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 OTOSQ8NHW6 89 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 SKA2Q8WVK7 121 aaPredicted RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 PNPLA2Q96AD5 504 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 DCUN1D5Q9BTE7 237 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 MOB1AQ9H8S9 216 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 TXNL4BQ9NX01 149 aaKnown RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 GSKIPQ9P0R6 139 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 GPR160Q9UJ42 338 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 TINCRA0A1B0GVN0 87 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 PATE3B3GLJ2 98 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 OR2T1O43869 369 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 GFRA3O60609 400 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 CGAP01215 116 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 C1QBP02746 253 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 OR8U9P0C7N5 309 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 VSIG8P0DPA2 414 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 RPL19P84098 196 aaKnown RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 UBE2V1Q13404 147 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 LAPTM4AQ15012 233 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 PRSS8Q16651 343 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 HSD17B12Q53GQ0 312 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 NHLRC3Q5JS37 347 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 PRR31Q5SQ13 230 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 SLC18B1Q6NT16 456 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 SSX6Q7RTT6 188 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 NIT1Q86X76 327 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 ZPLD1Q8TCW7 415 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 SMIM12Q96EX1 92 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 WBP1Q96G27 269 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 OR8B4Q96RC9 309 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 ARV1Q9H2C2 271 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 FOXJ2Q9P0K8 574 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 CLCF1Q9UBD9 225 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 DHCR7Q9UBM7 475 aaKnown RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 TMED7-TICAM2A0A0A6YYA0 188 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 ANKRD20A5PA0PJZ0 165 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 FAM172BPA6NC97 362 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 FAM231BA6NCW3 169 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 ZNF732B4DXR9 585 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 B5MCH6 92 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 C5orf58C9J3I9 102 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 GPR31O00270 319 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 H2BFMP0C1H6 154 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 COX5AP20674 150 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 PYCR1P32322 319 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 BTCP35070 178 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 OR3A3P47888 321 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 RBP2P50120 134 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 TAS2R41P59536 307 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 FABP5Q01469 135 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 COL10A1Q03692 680 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 RPL18Q07020 188 aaKnown RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 MFAP5Q13361 173 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 TMEM97Q5BJF2 176 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 VWA2Q5GFL6 755 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 C1orf140Q5VVS0 124 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 B3GNTL1Q67FW5 361 aaPredicted RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 OLFML2AQ68BL7 652 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 CBLN2Q8IUK8 224 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 OR4N5Q8IXE1 308 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 SPICQ8N5J4 248 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 KCTD7Q96MP8 289 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 QTRT1Q9BXR0 403 aaKnown RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 ZBTB20Q9HC78 741 aaPredicted RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 SCN3BQ9NY72 215 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 DKKL1Q9UK85 242 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 LOXL2Q9Y4K0 774 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 ORC6Q9Y5N6 252 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 MSGN1A6NI15 193 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 HSD17B6O14756 317 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 RGS5O15539 181 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 MT-CO3P00414 261 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 BMP4P12644 408 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 RAB6AP20340 208 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 FMO3P31513 532 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DAP3P51398 398 aaKnown RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 UBE2E1P51965 193 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DGCR2P98153 550 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 RIPPLY1Q0D2K3 151 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 ENDOGQ14249 297 aaKnown RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 QPRTQ15274 297 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DEFB110Q30KQ9 67 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 ALG10BQ5I7T1 473 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 ZNF585AQ6P3V2 769 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 OPN5Q6U736 354 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 BAIAP2L2Q6UXY1 529 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 P2RY8Q86VZ1 359 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DLX4Q92988 240 aaPredicted RBP3.23□□□□□ -1.89
MCF2-203ENST00000370576 UBE2E2Q96LR5 201 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DERL3Q96Q80 235 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 OR2M2Q96R28 347 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 MGLLQ99685 303 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 RASL11BQ9BPW5 248 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DCTN5Q9BTE1 182 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 TMEM9BQ9NQ34 198 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DEPPQ9NTK1 212 aa3.23□□□□□ -1.89
MCF2-203ENST00000370576 DKK2Q9UBU2 259 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms