RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SIRT5Q9NXA8 310 aa11.03□□□□□ -0.64
HCFC1-202ENST00000369984 DNAJB12Q9NXW2 375 aaKnown RBP11.03□□□□□ -0.64
HCFC1-202ENST00000369984 PLPP3O14495 311 aa11.02□□□□□ -0.64
HCFC1-202ENST00000369984 RTP5Q14D33 572 aa11.02□□□□□ -0.64
HCFC1-202ENST00000369984 TWIST1Q15672 202 aa11.02□□□□□ -0.64
HCFC1-202ENST00000369984 PRICKLE4Q2TBC4 344 aa11.02□□□□□ -0.64
HCFC1-202ENST00000369984 RAB1BQ9H0U4 201 aa11.02□□□□□ -0.64
HCFC1-202ENST00000369984 ERVFRD-1P60508 538 aa11.02□□□□□ -0.64
HCFC1-202ENST00000369984 LEMD1Q68G75 181 aa11.02□□□□□ -0.64
HCFC1-202ENST00000369984 RPS4Y2Q8TD47 263 aa11.02□□□□□ -0.64
HCFC1-202ENST00000369984 TMEM210A6NLX4 147 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 PABPC1L2AQ5JQF8 200 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 AUP1Q9Y679 476 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 HAND1O96004 215 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 SPATA45Q537H7 98 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 LRRC29Q8WV35 223 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 CXXC4Q9H2H0 198 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 RBM11P57052 281 aaKnown RBP11.02□□□□□ -0.65
HCFC1-202ENST00000369984 OR10D3Q8NH80 312 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 R3HDM4Q96D70 268 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 TREM2Q9NZC2 230 aa11.02□□□□□ -0.65
HCFC1-202ENST00000369984 XIRP1Q702N8 1843 aaKnown RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 CHST1O43916 411 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 GNG7O60262 68 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 CXorf1O96002 111 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 DAOP14920 347 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 OR4C13Q8NGP0 309 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 GABRG3Q99928 467 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 ASCL3Q9NQ33 180 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 PRR13Q9NZ81 148 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 SMAD4Q13485 552 aaKnown RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 BEND2Q8NDZ0 799 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 BVESQ8NE79 360 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 SSMEM1Q8WWF3 244 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 HIST1H4GQ99525 98 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 ZFP30Q9Y2G7 519 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 IGKV3-7A0A075B6H7 116 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 ABHD1Q96SE0 405 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 GPR27Q9NS67 375 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 PCOLCE2Q9UKZ9 415 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 ASPDHA6ND91 283 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 CACNG7P62955 275 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 IL11RAQ14626 422 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 FAHD2BQ6P2I3 314 aaPredicted RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 NUDT16L1Q9BRJ7 211 aaKnown RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 SMPD2O60906 423 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 APELAP0DMC3 54 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 IER3P46695 156 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 NUBPLQ8TB37 319 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 WNK3Q9BYP7 1800 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 LILRA5A6NI73 299 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 MRPL54Q6P161 138 aaKnown RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 CBLN2Q8IUK8 224 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 OR8B12Q8NGG6 310 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 COL25A1Q9BXS0 654 aaPredicted RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 ALPK2Q86TB3 2170 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 A0A1B0GTH9 108 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 CDKN2AP42771 156 aaKnown RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 RTN4RL1Q86UN2 441 aaPredicted RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 TMEM183AQ8IXX5 376 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 ZNF707Q96C28 371 aaPredicted RBP11.01□□□□□ -0.65
HCFC1-202ENST00000369984 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
HCFC1-202ENST00000369984 NHSQ6T4R5 1651 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 BTF3P20290 206 aaKnown RBP11□□□□□ -0.65
HCFC1-202ENST00000369984 FZD5Q13467 585 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 ANKRD55Q3KP44 614 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 Q6ZNB5 142 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 MYEOVQ96EZ4 313 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 SIRT7Q9NRC8 400 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 SIPA1L3O60292 1781 aaPredicted RBP11□□□□□ -0.65
HCFC1-202ENST00000369984 FAM90A27PA6NNH2 459 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 ASB10Q8WXI3 467 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 SFRP2Q96HF1 295 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 ARID2Q68CP9 1835 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 SNURFLB1AK76 121 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 NDUFS8O00217 210 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 MPZL1O95297 269 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 FAM157CP0CG43 387 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 C17orf47Q8NEP4 570 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 CEP290O15078 2479 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 CES1P1Q9UKY3 287 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 SH2D5Q6ZV89 423 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 ADTRPQ96IZ2 230 aa11□□□□□ -0.65
HCFC1-202ENST00000369984 RPL34P49207 117 aaKnown RBP10.99□□□□□ -0.65
HCFC1-202ENST00000369984 SNRNP40Q96DI7 357 aaKnown RBP10.99□□□□□ -0.65
HCFC1-202ENST00000369984 QSER1Q2KHR3 1735 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 A0A1B0GV90 55 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 ADAP1O75689 374 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 SBK3P0C264 359 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 ID1P41134 155 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 FAM109BQ6ICB4 259 aaPredicted RBP10.99□□□□□ -0.65
HCFC1-202ENST00000369984 VSTM2AQ8TAG5 236 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 FXYD1O00168 92 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 CXCL3P19876 107 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 DEGS2Q6QHC5 323 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 ZNF793Q6ZN11 406 aa10.99□□□□□ -0.65
HCFC1-202ENST00000369984 ZNF418Q8TF45 676 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms