RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 MRGPRX4Q96LA9 322 aa12.4□□□□□ -0.43
PHTF1-204ENST00000369604 SIGLEC12Q96PQ1 595 aa12.4□□□□□ -0.43
PHTF1-204ENST00000369604 P2RX4Q99571 388 aa12.4□□□□□ -0.43
PHTF1-204ENST00000369604 KIAA2026Q5HYC2 2103 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 CNOT4O95628 575 aaKnown RBP12.39□□□□□ -0.43
PHTF1-204ENST00000369604 WNT5AP41221 380 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 SHBQ15464 509 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 ZNF726P1Q15940 193 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 ABLIM2Q6H8Q1 611 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 OR51H1Q8NH63 302 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 R3HDM4Q96D70 268 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 CCL28Q9NRJ3 127 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 PLA2G3Q9NZ20 509 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 A0A1W2PR80 420 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 MDH2P40926 338 aaKnown RBP12.39□□□□□ -0.43
PHTF1-204ENST00000369604 SUMO3P55854 103 aaPredicted RBP12.39□□□□□ -0.43
PHTF1-204ENST00000369604 EXT1Q16394 746 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 ACOT6Q3I5F7 207 aaPredicted RBP12.39□□□□□ -0.43
PHTF1-204ENST00000369604 MS4A10Q96PG2 267 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 NAGKQ9UJ70 344 aa12.39□□□□□ -0.43
PHTF1-204ENST00000369604 IGHV3-15A0A0B4J1V0 119 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 IGKV1-12A0A0C4DH73 117 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 IGKV1D-12P01611 117 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 HOXA6P31267 233 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 RAB35Q15286 201 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 COA6Q5JTJ3 125 aaKnown RBP12.38□□□□□ -0.43
PHTF1-204ENST00000369604 PIGCQ92535 297 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 TBX15Q96SF7 602 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 MAP1BP46821 2468 aaKnown RBP12.38□□□□□ -0.43
PHTF1-204ENST00000369604 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 B4E171 279 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 NRASP01111 189 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 HRASP01112 189 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 SERPINE2P07093 398 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 TSPAN7P41732 249 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 PAX9P55771 341 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 RPL23P62829 140 aaKnown RBP12.38□□□□□ -0.43
PHTF1-204ENST00000369604 KCNMB1Q16558 191 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 PLPPR5Q32ZL2 321 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 TGIF2LYQ8IUE0 185 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 OR4F5Q8NH21 305 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 OR1L3Q8NH93 324 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 POC1BQ8TC44 478 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 IL22RA2Q969J5 263 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 SDSLQ96GA7 329 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 OR4F4Q96R69 305 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 WNT16Q9UBV4 365 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 ARHGAP21Q5T5U3 1957 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 CNN1P51911 297 aaKnown RBP12.38□□□□□ -0.43
PHTF1-204ENST00000369604 ZNF92Q03936 586 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 RSPO1Q2MKA7 263 aaPredicted RBP12.38□□□□□ -0.43
PHTF1-204ENST00000369604 NMSQ5H8A3 153 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 C1orf194Q5T5A4 169 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 CYP2G1PQ6ZSU1 146 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 DEFB119Q8N690 84 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 ABHD14BQ96IU4 210 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 SEMA5BQ9P283 1151 aa12.38□□□□□ -0.43
PHTF1-204ENST00000369604 POLR3KQ9Y2Y1 108 aaPredicted RBP12.38□□□□□ -0.43
PHTF1-204ENST00000369604 PCDH15Q96QU1 1955 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 TRBV11-1A0A0K0K1C0 115 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 IGLV3-1P01715 115 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 IGHV4-34P06331 123 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 SCTP09683 121 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 CTSSP25774 331 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 CHRNA7P36544 502 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 MEF2BQ02080 365 aaPredicted RBP12.37□□□□□ -0.43
PHTF1-204ENST00000369604 ENDOGQ14249 297 aaKnown RBP12.37□□□□□ -0.43
PHTF1-204ENST00000369604 SHHQ15465 462 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 MAML2Q8IZL2 1156 aaPredicted RBP12.37□□□□□ -0.43
PHTF1-204ENST00000369604 PTRH2Q9Y3E5 179 aaKnown RBP12.37□□□□□ -0.43
PHTF1-204ENST00000369604 PSMB3P49720 205 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 DEFB133Q30KQ1 61 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 PHYHD1Q5SRE7 291 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 PLCXD3Q63HM9 321 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 DNASE2BQ8WZ79 361 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 RNF150Q9ULK6 438 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 FAM186AA6NE01 2351 aa12.37□□□□□ -0.43
PHTF1-204ENST00000369604 CHD3Q12873 2000 aaKnown RBP12.37□□□□□ -0.43
PHTF1-204ENST00000369604 IGKV1D-13A0A0B4J2D9 117 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 A0A1B0GUS0 222 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 KBTBD11O94819 623 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 IGKV1-13P0DP09 117 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 CD33P20138 364 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 OR10J1P30954 320 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 TMEM41BQ5BJD5 291 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 DCAF10Q5QP82 559 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.36□□□□□ -0.43
PHTF1-204ENST00000369604 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 TMEM211Q6ICI0 200 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 LHFPL2Q6ZUX7 228 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 OR10G3Q8NGC4 313 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 MBD3L1Q8WWY6 194 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 EXTL1Q92935 676 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 C10orf35Q96D05 121 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 TAAR3PQ9P1P4 343 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 NPIPA2E9PIF3 369 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 NPIPA3F8WFD2 350 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 HPRT1P00492 218 aa12.36□□□□□ -0.43
PHTF1-204ENST00000369604 PDGFBP01127 241 aaPredicted RBP12.36□□□□□ -0.43
PHTF1-204ENST00000369604 DMRTA1Q5VZB9 504 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms