RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 LRP5LA4QPB2 252 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 ADAM20O43506 726 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 CEACAM6P40199 344 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 NKX2-1P43699 371 aaPredicted RBP11.74□□□□□ -0.53
SHC1-202ENST00000368445 EIF5AP63241 154 aaKnown RBP11.74□□□□□ -0.53
SHC1-202ENST00000368445 SAXO1Q8IYX7 474 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 DEFB108BQ8NET1 73 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 DEFB108AA8MXU0 73 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 PVALBP20472 110 aaPredicted RBP11.74□□□□□ -0.53
SHC1-202ENST00000368445 HNF4GQ14541 408 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 WDR86Q86TI4 376 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 RNF141Q8WVD5 230 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 STARD4Q96DR4 205 aa11.74□□□□□ -0.53
SHC1-202ENST00000368445 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 PROB1E7EW31 1015 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 CTXN2P0C2S0 81 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 BEND4Q6ZU67 534 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 LHFPL5Q8TAF8 219 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 ABHD17AQ96GS6 310 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 RIMS4Q9H426 269 aaPredicted RBP11.73□□□□□ -0.53
SHC1-202ENST00000368445 RCL1Q9Y2P8 373 aaKnown RBP11.73□□□□□ -0.53
SHC1-202ENST00000368445 DCHS1Q96JQ0 3298 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 COL27A1Q8IZC6 1860 aaPredicted RBP11.73□□□□□ -0.53
SHC1-202ENST00000368445 DOCK11Q5JSL3 2073 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 CST7O76096 145 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 HAND1O96004 215 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 OR3A1P47881 315 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 NHLH2Q02577 135 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 HERPUD1Q15011 391 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 ASCL5Q7RTU5 278 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
SHC1-202ENST00000368445 S100PBPQ96BU1 408 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 SHARPINQ9H0F6 387 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 GLAP06280 429 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 FAM27E3Q08E93 113 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 STPG2Q8N412 459 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 PLPPR1Q8TBJ4 325 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 MRGPRDQ8TDS7 321 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 TAAR3PQ9P1P4 343 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 MED13LQ71F56 2210 aa11.73□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A18PA6NE21 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A16PA6NEW6 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 TUBAL3A6NHL2 446 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A20PA6NIJ5 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A12PA8MX19 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A5PA8MXJ8 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A15PP0C7V4 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A13PP0C7W8 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A14PP0C7W9 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 FAM90A24PP0C7X0 464 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 WDR31Q8NA23 367 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 PKIBQ9C010 78 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 E5RGE8 158 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 NAPSAO96009 420 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 HKR1P10072 659 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 PMELP40967 661 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 EDDM3BP56851 147 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 CXorf66Q5JRM2 361 aaPredicted RBP11.72□□□□□ -0.53
SHC1-202ENST00000368445 OR8G5Q8NG78 346 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 OR10V1Q8NGI7 309 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 LRRC29Q8WV35 223 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 MARC2Q969Z3 335 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 NSG2Q9Y328 171 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 BORCS7-ASMTA0A0B4J1R7 106 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 IGKV1-6A0A0C4DH72 117 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 MFSD2BA6NFX1 497 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 OR5H1A6NKK0 313 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
SHC1-202ENST00000368445 SRSF4Q08170 494 aaKnown RBP11.72□□□□□ -0.53
SHC1-202ENST00000368445 LRP11Q86VZ4 500 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 BVESQ8NE79 360 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 OR2W1Q9Y3N9 320 aa11.72□□□□□ -0.53
SHC1-202ENST00000368445 SELENOVP59797 346 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 HLA-DRB3P79483 266 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 Q8IYB0 196 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 ERGIC1Q969X5 290 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 SPIN2AQ99865 258 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 DHRS9Q9BPW9 319 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 SPIN2BQ9BPZ2 258 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 FAM234AQ9H0X4 552 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 DKK4Q9UBT3 224 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 TMED3Q9Y3Q3 217 aa11.71□□□□□ -0.53
SHC1-202ENST00000368445 IGHV3OR15-7A0A075B7D8 119 aa11.71□□□□□ -0.54
SHC1-202ENST00000368445 PRRG2O14669 202 aa11.71□□□□□ -0.54
SHC1-202ENST00000368445 DEDDO75618 318 aa11.71□□□□□ -0.54
SHC1-202ENST00000368445 WFDC8Q8IUA0 241 aa11.71□□□□□ -0.54
SHC1-202ENST00000368445 ARL11Q969Q4 196 aa11.71□□□□□ -0.54
SHC1-202ENST00000368445 TSNAXQ99598 290 aaKnown RBP11.71□□□□□ -0.54
SHC1-202ENST00000368445 IGHV2OR16-5A0A0B4J2B6 119 aa11.7□□□□□ -0.54
SHC1-202ENST00000368445 PSG2P11465 335 aa11.7□□□□□ -0.54
SHC1-202ENST00000368445 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
SHC1-202ENST00000368445 P2RY6Q15077 328 aa11.7□□□□□ -0.54
SHC1-202ENST00000368445 MSI2Q96DH6 328 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms