RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 XAF1Q6GPH4 301 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 RPL22L1Q6P5R6 122 aaKnown RBP12.62□□□□□ -0.39
CKS1B-202ENST00000368436 TGIF2LXQ8IUE1 241 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 FOXRED2Q8IWF2 684 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 IZUMO1Q8IYV9 350 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 STPG2Q8N412 459 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 Q8N6K4 173 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 C8orf31Q8N9H6 132 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 OR52N1Q8NH53 320 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 EAF1Q96JC9 268 aaPredicted RBP12.62□□□□□ -0.39
CKS1B-202ENST00000368436 C9orf16Q9BUW7 83 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 METTL9Q9H1A3 318 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 TMEM138Q9NPI0 162 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 ING4Q9UNL4 249 aa12.62□□□□□ -0.39
CKS1B-202ENST00000368436 TMEM30CPA0ZSE6 113 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 NUDT19A8MXV4 375 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 CCRL2O00421 344 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 GEMIN2O14893 280 aaKnown RBP12.61□□□□□ -0.39
CKS1B-202ENST00000368436 OR7C1O76099 320 aaPredicted RBP12.61□□□□□ -0.39
CKS1B-202ENST00000368436 ZNF93P35789 620 aaPredicted RBP12.61□□□□□ -0.39
CKS1B-202ENST00000368436 MPV17LQ2QL34 196 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 MOB3BQ86TA1 216 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 LINC00596Q86U02 117 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 ZNF695Q8IW36 515 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 KLHL30-AS1Q8NEE0 82 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 ST6GALNAC6Q969X2 333 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 TMEM106AQ96A25 262 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 B9D2Q9BPU9 175 aa12.61□□□□□ -0.39
CKS1B-202ENST00000368436 LIN7CQ9NUP9 197 aaKnown RBP12.61□□□□□ -0.39
CKS1B-202ENST00000368436 H0YHG0 523 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 OGG1O15527 345 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 ORC5O43913 435 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 CSTBP04080 98 aaKnown RBP12.6□□□□□ -0.39
CKS1B-202ENST00000368436 GPR12P47775 334 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 REG1BP48304 166 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 DDI2Q5TDH0 399 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 TEX38Q6PEX7 206 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 Q8N9W7 124 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 TMEM104Q8NE00 496 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 OR2T10Q8NGZ9 312 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 ARL11Q969Q4 196 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 ABCG5Q9H222 651 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 PLSCR3Q9NRY6 295 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 PAK1IP1Q9NWT1 392 aaPredicted RBP12.6□□□□□ -0.39
CKS1B-202ENST00000368436 GFOD1Q9NXC2 390 aa12.6□□□□□ -0.39
CKS1B-202ENST00000368436 SIRT4Q9Y6E7 314 aaPredicted RBP12.6□□□□□ -0.39
CKS1B-202ENST00000368436 KMT2CQ8NEZ4 4911 aaKnown RBP12.6□□□□□ -0.39
CKS1B-202ENST00000368436 IGHV3-72A0A0B4J1Y9 119 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 AP4M1O00189 453 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 SDCBPO00560 298 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-202ENST00000368436 ZNF780AO75290 641 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-202ENST00000368436 WBP4O75554 376 aaKnown RBP12.59□□□□□ -0.39
CKS1B-202ENST00000368436 MT-ND4P03905 459 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 IGFBP3P17936 291 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-202ENST00000368436 SERPINA2P20848 420 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 CD1BP29016 333 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 BDKRB2P30411 391 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 ETV1P50549 477 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 PPP3R1P63098 170 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 CD69Q07108 199 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 SMN1Q16637 294 aaKnown RBP12.59□□□□□ -0.39
CKS1B-202ENST00000368436 PNLIPRP3Q17RR3 467 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 Q3ZCU0 254 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 ZNF497Q6ZNH5 498 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 C10orf67Q8IYJ2 551 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 CCDC107Q8WV48 283 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 RTN4IP1Q8WWV3 396 aaPredicted RBP12.59□□□□□ -0.39
CKS1B-202ENST00000368436 RAX2Q96IS3 184 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 GON7Q9BXV9 100 aa12.59□□□□□ -0.39
CKS1B-202ENST00000368436 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.59□□□□□ -0.39
CKS1B-202ENST00000368436 ZMAT5Q9UDW3 170 aaKnown RBP12.59□□□□□ -0.39
CKS1B-202ENST00000368436 A0A1W2PP11 408 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 NCBP2LA6PVI3 153 aaKnown RBP12.58□□□□□ -0.4
CKS1B-202ENST00000368436 GPX5O75715 221 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 DCKP27707 260 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 GP2P55259 537 aaKnown RBP12.58□□□□□ -0.4
CKS1B-202ENST00000368436 DCTN2Q13561 401 aaKnown RBP12.58□□□□□ -0.4
CKS1B-202ENST00000368436 ATAD3CQ5T2N8 411 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 OR2G6Q5TZ20 316 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 FAM53AQ6NSI3 398 aaPredicted RBP12.58□□□□□ -0.4
CKS1B-202ENST00000368436 UNQ9370/PRO34162Q6UXP9 181 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 TMPRSS11AQ6ZMR5 421 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 RNF152Q8N8N0 203 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 UBALD1Q8TB05 177 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 ORAI1Q96D31 301 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 SMIM19Q96E16 107 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 S100A13Q99584 98 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 DCLRE1BQ9H816 532 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 BABAM2Q9NXR7 383 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 NBEAL2Q6ZNJ1 2754 aa12.58□□□□□ -0.4
CKS1B-202ENST00000368436 CCL24O00175 119 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 MOSP00540 346 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
CKS1B-202ENST00000368436 GTF2F2P13984 249 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 IL3RAP26951 378 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 CDX1P47902 265 aaPredicted RBP12.57□□□□□ -0.4
CKS1B-202ENST00000368436 ZNF137PP52743 207 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 DGCR2P98153 550 aa12.57□□□□□ -0.4
CKS1B-202ENST00000368436 FOXE3Q13461 319 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms