RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 DNAJC13O75165 2243 aa7.64□□□□□ -1.19
SYNE1-206ENST00000367253 F5P12259 2224 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 NINQ8N4C6 2090 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 MCM3APO60318 1980 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 PPIAL4EA0A075B759 164 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 PPIAL4DF5H284 164 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 J3KTA2 159 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 FCN1O00602 326 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 RBP4P02753 201 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 PPIAL4FP0DN26 164 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 CEACAM16Q2WEN9 425 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 PELI3Q8N2H9 469 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 OR2M3Q8NG83 312 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 OR10AG1Q8NH19 301 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 OR10J5Q8NHC4 309 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 PRSS3P2Q8NHM4 247 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 GPX7Q96SL4 187 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 ADAT1Q9BUB4 502 aaKnown RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 SEC11CQ9BY50 192 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 NDUFB11Q9NX14 153 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 METTL1Q9UBP6 276 aaKnown RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 TUBD1Q9UJT1 453 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 PPIAL4AQ9Y536 164 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 IFITM10A6NMD0 228 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 PSMB5P28074 263 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 FAM3BP58499 235 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 SRSF2Q01130 221 aaKnown RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 GCSAMLQ5JQS6 135 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 GLIPR1L1Q6UWM5 242 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 OR4B1Q8NGF8 309 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 MARCH1Q8TCQ1 289 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF714Q96N38 554 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 MCRIP2Q9BUT9 160 aaKnown RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 SLC35B3Q9H1N7 401 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 SSSCA1O60232 199 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 LIM2P55344 173 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 MRPL58Q14197 206 aaKnown RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 IL17DQ8TAD2 202 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 POM121L2Q96KW2 1035 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 PLA2G2FQ9BZM2 168 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 IL21Q9HBE4 155 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 ASIC5Q9NY37 505 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 C7orf77A4D0Y5 90 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF140P52738 457 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 GNG3P63215 75 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 GNG5P63218 68 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 AQP6Q13520 282 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 AWAT1Q58HT5 328 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 SH2D5Q6ZV89 423 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 ATOH7Q8N100 152 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 NANOGP1Q8N7R0 232 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 DUX5Q96PT3 197 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 RPP25Q9BUL9 199 aaKnown RBP7.63□□□□□ -1.19
SYNE1-206ENST00000367253 TIMM9Q9Y5J7 89 aa7.63□□□□□ -1.19
SYNE1-206ENST00000367253 WDR90Q96KV7 1748 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 TMEM30CPA0ZSE6 113 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 RCC1P18754 421 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-206ENST00000367253 ATF1P18846 271 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 CD200P41217 278 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 CSRP3P50461 194 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 UBE2MP61081 183 aaKnown RBP7.62□□□□□ -1.19
SYNE1-206ENST00000367253 TMEM241Q24JQ0 296 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 MIDNQ504T8 468 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 SPATA45Q537H7 98 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 PWWP2BQ6NUJ5 590 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 ANKRD37Q7Z713 158 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 TAAR6Q96RI8 345 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 WDR61Q9GZS3 305 aaKnown RBP7.62□□□□□ -1.19
SYNE1-206ENST00000367253 RABAC1Q9UI14 185 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 IGHV5-10-1A0A0J9YXX1 117 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 LYZL6O75951 148 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 EVX1P49640 407 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 PMP22Q01453 160 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 MRPL23Q16540 153 aaKnown RBP7.62□□□□□ -1.19
SYNE1-206ENST00000367253 SP5Q6BEB4 398 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-206ENST00000367253 MBOAT2Q6ZWT7 520 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 COPS9Q8WXC6 57 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 OR2A5Q96R48 311 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 PLA2G12AQ9BZM1 189 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 DUSP21Q9H596 190 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF665Q9H7R5 613 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 HSF4Q9ULV5 492 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 SIRT4Q9Y6E7 314 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-206ENST00000367253 CITO14578 2027 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 M0R135 149 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 P2RY10O00398 339 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 MOSPD3O75425 235 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 GYPAP02724 150 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 CEACAM5P06731 702 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 HOXA6P31267 233 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 LOXL3P58215 753 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 SLC48A1Q6P1K1 146 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF880Q6PDB4 577 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 LYG2Q86SG7 212 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 MYPOPQ86VE0 399 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-206ENST00000367253 OR1N2Q8NGR9 330 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 PATE1Q8WXA2 126 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 MARVELD3Q96A59 401 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms