RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 MSRB2Q9Y3D2 182 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 LIPGQ9Y5X9 500 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 FREM2Q5SZK8 3169 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 A0A087X0M5 115 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 A0A0G2JMM0 328 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 A0A1B0GX30 115 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 A0A1W2PPB8 328 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 A0A1W2PRS3 328 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 KIR3DP1A8MWS1 328 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 TSTD3H0UI37 97 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 GEMIN2O14893 280 aaKnown RBP12.64□□□□□ -0.39
PRKN-204ENST00000366896 SCAF4O95104 1147 aaKnown RBP12.64□□□□□ -0.39
PRKN-204ENST00000366896 NRASP01111 189 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 HSPB1P04792 205 aaKnown RBP12.64□□□□□ -0.39
PRKN-204ENST00000366896 PAX1P15863 534 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 SRPXP78539 464 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 SRSF6Q13247 344 aaKnown RBP12.64□□□□□ -0.39
PRKN-204ENST00000366896 PDCD1Q15116 288 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 ZNF124Q15973 351 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 SRSF7Q16629 238 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRKN-204ENST00000366896 Q6ZS49 121 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 FAM185AQ8N0U4 392 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 CYB561D1Q8N8Q1 229 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 ZFP62Q8NB50 900 aaPredicted RBP12.64□□□□□ -0.39
PRKN-204ENST00000366896 SGCZQ96LD1 299 aa12.64□□□□□ -0.39
PRKN-204ENST00000366896 PDCD6O75340 191 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 TRGC1P0CF51 173 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 B4GALT1P15291 398 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 SRD5A2P31213 254 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 CEBPGP53567 150 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 MLF1P58340 268 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 GNMTQ14749 295 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 ZNF506Q5JVG8 444 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 OR2T2Q6IF00 324 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 Q6ZPA2 131 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 SLC35E3Q7Z769 313 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 STX12Q86Y82 276 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 OR2C3Q8N628 320 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 Q8NFD4 153 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 OR5L1Q8NGL2 311 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 OR14L1PQ8NHC6 308 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 ALKBH3Q96Q83 286 aaPredicted RBP12.63□□□□□ -0.39
PRKN-204ENST00000366896 NIPSNAP3BQ9BS92 247 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 CRLF2Q9HC73 371 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 KIAA1549Q9HCM3 1950 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 hCG_38984A0A1B0GV85 526 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 LCATP04180 440 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 FABP4P15090 132 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 NDUFB7P17568 137 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 B3GALT5-AS1P59052 145 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 PCBD1P61457 104 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 Q0VFX4 171 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 SLC22A25Q6T423 547 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 RPS19BP1Q86WX3 136 aaKnown RBP12.63□□□□□ -0.39
PRKN-204ENST00000366896 OR11L1Q8NGX0 322 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 RNASE11Q8TAA1 199 aaKnown RBP12.63□□□□□ -0.39
PRKN-204ENST00000366896 ABHD5Q8WTS1 349 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 WSB1Q9Y6I7 421 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 SPTBN4Q9H254 2564 aa12.63□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A18PA6NE21 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A16PA6NEW6 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A20PA6NIJ5 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A8PA6NJQ4 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 ZNF716A6NP11 495 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A22PA8MWA6 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A12PA8MX19 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A5PA8MXJ8 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 PITX3O75364 302 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 CDS2O95674 445 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A15PP0C7V4 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A13PP0C7W8 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A14PP0C7W9 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM90A24PP0C7X0 464 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 BATF2Q8N1L9 274 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FRZBQ92765 325 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 ABHD14BQ96IU4 210 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 SLC7A11Q9UPY5 501 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 FAM24AA6NFZ4 105 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 ZNF32P17041 273 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 NRN1LQ496H8 165 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 YRDCQ86U90 279 aaKnown RBP12.62□□□□□ -0.39
PRKN-204ENST00000366896 SPSB4Q96A44 273 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 PRO1933Q9H354 126 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 AKAP13Q12802 2813 aa12.62□□□□□ -0.39
PRKN-204ENST00000366896 IGSF23A1L1A6 192 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 WT1P19544 449 aaPredicted RBP12.61□□□□□ -0.39
PRKN-204ENST00000366896 MALLQ13021 153 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 LBHQ53QV2 105 aaPredicted RBP12.61□□□□□ -0.39
PRKN-204ENST00000366896 ABLIM2Q6H8Q1 611 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 OR5R1Q8NH85 324 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 FGFBP3Q8TAT2 258 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 B4DEV8 164 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 RBM11P57052 281 aaKnown RBP12.61□□□□□ -0.39
PRKN-204ENST00000366896 ATP1A1-AS1Q5TC04 95 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 FIP1L1Q6UN15 594 aaKnown RBP12.61□□□□□ -0.39
PRKN-204ENST00000366896 TMEM171Q8WVE6 324 aa12.61□□□□□ -0.39
PRKN-204ENST00000366896 FAM210BQ96KR6 192 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms