RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 EFEMP2O95967 443 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 DAOP14920 347 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 IL11P20809 199 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 TMEM30BQ3MIR4 351 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 SAXO1Q8IYX7 474 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 CCL28Q9NRJ3 127 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 RAB29O14966 203 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 PRF1P14222 555 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 APCDD1LQ8NCL9 501 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 OR8G5Q8NG78 346 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 HARBI1Q96MB7 349 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 POMT1Q9Y6A1 747 aa11.71□□□□□ -0.53
LDB3-202ENST00000361373 MEX3AA1L020 520 aaKnown RBP11.71□□□□□ -0.54
LDB3-202ENST00000361373 SEMA7AO75326 666 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 INPP5JQ15735 1006 aaPredicted RBP11.71□□□□□ -0.54
LDB3-202ENST00000361373 C10orf128Q5T292 105 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 PAX5Q02548 391 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 OR5R1Q8NH85 324 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 TMEM45BQ96B21 275 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 SAT2Q96F10 170 aaPredicted RBP11.71□□□□□ -0.54
LDB3-202ENST00000361373 PGLYRP3Q96LB9 341 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 FBXL17Q9UF56 701 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 RNF115Q9Y4L5 304 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.54
LDB3-202ENST00000361373 TIAF1O95411 115 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 HLA-GP17693 338 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 MC5RP33032 325 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 C1orf100Q5SVJ3 147 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 SEZ6L2Q6UXD5 910 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 SNX22Q96L94 193 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 KCNK15Q9H427 330 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 CISD1Q9NZ45 108 aaKnown RBP11.7□□□□□ -0.54
LDB3-202ENST00000361373 OR5H1A6NKK0 313 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 ASCL1P50553 236 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 POLR2GP62487 172 aaKnown RBP eCLIP11.7□□□□□ -0.54
LDB3-202ENST00000361373 CCL8P80075 99 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 KLF9Q13886 244 aaPredicted RBP11.7□□□□□ -0.54
LDB3-202ENST00000361373 MIDNQ504T8 468 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 VAX1Q5SQQ9 334 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 TMEM231Q9H6L2 316 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
LDB3-202ENST00000361373 PRSS50Q9UI38 385 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 LTBP1Q14766 1721 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 K7N7A8 449 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 BATFQ16520 125 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 PRR27Q6MZM9 219 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 ZNF714Q96N38 554 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 GNG7O60262 68 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 ERVFC1-1P60608 527 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 COL10A1Q03692 680 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 ZNF260Q3ZCT1 412 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 STXBP6Q8NFX7 210 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 OR10G9Q8NGN4 311 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 OR10G7Q8NGN6 311 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 OR1L6Q8NGR2 347 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 ADAMTS17Q8TE56 1095 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 OR2V2Q96R30 315 aa11.7□□□□□ -0.54
LDB3-202ENST00000361373 SERTM2A0A1B0GWG4 89 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 SLC25A5P05141 298 aaKnown RBP11.69□□□□□ -0.54
LDB3-202ENST00000361373 CTSBP07858 339 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 FDX2Q6P4F2 183 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 ATP5SQ99766 215 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 OR1A1Q9P1Q5 309 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 TRPM7Q96QT4 1865 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 IGLV3-12A0A075B6K2 115 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 TMEM229AB2RXF0 380 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 TMEM33P57088 247 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 AESQ08117 197 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 GHITMQ9H3K2 345 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 MMP24Q9Y5R2 645 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 IGKV1D-42A0A075B6H8 117 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 DNASE2O00115 360 aaPredicted RBP11.69□□□□□ -0.54
LDB3-202ENST00000361373 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 FBLIM1Q8WUP2 373 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 NEURL2Q9BR09 285 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 COA4Q9NYJ1 87 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 LHFPL6Q9Y693 200 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 ADAP1O75689 374 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 ADRA2AP08913 450 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 MPV17P39210 176 aa11.69□□□□□ -0.54
LDB3-202ENST00000361373 ZCCHC14Q8WYQ9 949 aaKnown RBP11.69□□□□□ -0.54
LDB3-202ENST00000361373 MRPS18CQ9Y3D5 142 aaKnown RBP11.69□□□□□ -0.54
LDB3-202ENST00000361373 LOC390937A0A1W2PQ73 354 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 C1QCP02747 245 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 Q6ZT83 130 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 FDCSPQ8NFU4 85 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 Q8WTZ3 238 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 TIMP4Q99727 224 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 TREM2Q9NZC2 230 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 CHST1O43916 411 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 IGHV3-13P01766 116 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 IGHV3-7P01780 117 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 FCGR3AP08637 254 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 ZNF66Q6ZN08 573 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 ZNF429Q86V71 674 aa11.68□□□□□ -0.54
LDB3-202ENST00000361373 TMEM105Q8N8V8 129 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms