RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 GNRHR2Q96P88 292 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 CYTL1Q9NRR1 136 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 LOC101059948A0A1B0GTJ6 334 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 CRYAAP02489 173 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 CEACAM6P40199 344 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 TMEM187Q14656 261 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 HLA-DRB5Q30154 266 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 GALMQ96C23 342 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 HSPB9Q9BQS6 159 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 SRD5A3Q9H8P0 318 aa13.94□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BKO60814 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BJP06899 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BOP23527 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BBP33778 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BDP58876 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BCP62807 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 CTAG1AP78358 180 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 ARG2P78540 354 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 PRDX4Q13162 271 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST2H2BEQ16778 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 ZNF506Q5JVG8 444 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 PRR27Q6MZM9 219 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 NAT6Q93015 286 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BHQ93079 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BNQ99877 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 HIST1H2BMQ99879 126 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 MENTQ9BUN1 341 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 OR1K1Q8NGR3 316 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 TAAR6Q96RI8 345 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 P2RX4Q99571 388 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 CBR3O75828 277 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 GABRG2P18507 467 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 TIMP4Q99727 224 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 PLA2G2FQ9BZM2 168 aa13.93□□□□□ -0.18
CLSTN1-201ENST00000361311 TIMM8AO60220 97 aaPredicted RBP13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 STARD6P59095 220 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 RPEL1Q2QD12 228 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 HEPN1Q6WQI6 88 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 AGBL5Q8NDL9 886 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 APOBEC3DQ96AK3 386 aaPredicted RBP13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 NDUFAF3Q9BU61 184 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 RPP25Q9BUL9 199 aaKnown RBP13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 A0A087WWC5 75 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 OR10J4P0C629 311 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 IRF2P14316 349 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 IGFBP3P17936 291 aaPredicted RBP13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 MZT1Q08AG7 82 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 PYY3Q5JQD4 70 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 BOD1Q96IK1 185 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 STRADBQ9C0K7 418 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 GPX4P36969 197 aaPredicted RBP13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 SPINK9Q5DT21 86 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 WDR73Q6P4I2 378 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 RNASEKQ6P5S7 137 aaKnown RBP13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 OR2V1Q8NHB1 315 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 DMRTA2Q96SC8 542 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 GNG3P63215 75 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 PAFAH1B2P68402 229 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 SCGB2A2Q13296 93 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 FZD5Q13467 585 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 CISD2Q8N5K1 135 aaKnown RBP13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 MOB3AQ96BX8 217 aa13.92□□□□□ -0.18
CLSTN1-201ENST00000361311 DIRC3C9JPN6 131 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 CER1O95813 267 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 GNG4P50150 75 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 AARDQ4LEZ3 155 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 STUMQ69YW2 141 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 MOB1BQ7L9L4 216 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 LRRC75AQ8NAA5 344 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 CISD1Q9NZ45 108 aaKnown RBP13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 TRBV6-7A0A0A0MS04 114 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 SNURFLB1AK76 121 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 LMO7DNF2Z398 122 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 CHEK1O14757 476 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 IER3P46695 156 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 TMEM230Q96A57 120 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 CCDC74BQ96LY2 380 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 RSPO3Q9BXY4 272 aaPredicted RBP13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 LHFPL6Q9Y693 200 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 PSG2P11465 335 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 DSCR4P56555 118 aaPredicted RBP13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 EIF3IQ13347 325 aaKnown RBP13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 ZNF721Q8TF20 911 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 TPPP3Q9BW30 176 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 C12orf49Q9H741 205 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 UBE2ZQ9H832 354 aaPredicted RBP13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 MS4A18H0YCH9 400 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 FAM157CP0CG43 387 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 TBC1D28Q2M2D7 210 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 MS4A18Q3C1V0 323 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 ABHD14BQ96IU4 210 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 GPHA2Q96T91 129 aa13.91□□□□□ -0.18
CLSTN1-201ENST00000361311 A0A0U1RQV5 110 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 CD82P27701 267 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 SRP14P37108 136 aaKnown RBP13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 TET1Q8NFU7 2136 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 SMAD4Q13485 552 aaKnown RBP13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 CNEP1R1Q8N9A8 125 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 OR1L6Q8NGR2 347 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms