RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 KNTC1P50748 2209 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 ARPC4-TTLL3A0A0A6YYG9 625 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 BGLAPP02818 100 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 ERVS71-1P61550 626 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 ATP6V1G2-DDX39BF2Z307 99 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 CPN1P15169 458 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 ST3GAL2Q16842 350 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 FAM78BQ5VT40 261 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 ZNF841Q6ZN19 808 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 SMIM4Q8WVI0 70 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 SLC45A2Q9UMX9 530 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 RNF24Q9Y225 148 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 BCL2L11O43521 198 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 CRYBB2P43320 205 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 RHOFQ9HBH0 211 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 ZNF586Q9NXT0 402 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 SCN4AP35499 1836 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 LURAP1Q96LR2 239 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 SCNM1Q9BWG6 230 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 CES1P1Q9UKY3 287 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 CHST1O43916 411 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 MVDP53602 400 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 PLXNA1Q9UIW2 1896 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 ERVFRD-1P60508 538 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 PSG4Q00888 419 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 ZNF770Q6IQ21 691 aaPredicted RBP17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 SEZ6L2Q6UXD5 910 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 DDA1Q9BW61 102 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 RNF122Q9H9V4 155 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 AURKAIP1Q9NWT8 199 aaPredicted RBP17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 TMED3Q9Y3Q3 217 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 ADAD2Q8NCV1 583 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 NUBP1P53384 320 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 BVESQ8NE79 360 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 C16orf92Q96LL3 132 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 DUSP21Q9H596 190 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 MAP1LC3B2A6NCE7 125 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 DHRS2Q13268 280 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 OR4B1Q8NGF8 309 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 MAP1LC3BQ9GZQ8 125 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 CACFD1Q9UGQ2 172 aa17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 SF3B6Q9Y3B4 125 aaKnown RBP17.68■□□□□ 0.42
CDC42BPB-201ENST00000361246 IGHV3-35A0A0C4DH35 117 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 SLC35B1P78383 322 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 FDX2Q6P4F2 183 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 ACSF3Q4G176 576 aaPredicted RBP17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 C10orf113Q5VZT2 155 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 RNF165Q6ZSG1 346 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 PRR33A8MZF0 331 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 PLAUP00749 431 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 FAM106CPP0CH98 169 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 ADAT3Q96EY9 351 aaPredicted RBP17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 ATP5SQ99766 215 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 YAE1D1Q9NRH1 226 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 RPEL1Q2QD12 228 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 TEX30Q5JUR7 227 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 ARRDC1Q8N5I2 433 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 NTNG2Q96CW9 530 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 KCNK17Q96T54 332 aa17.67■□□□□ 0.42
CDC42BPB-201ENST00000361246 HSBP1O75506 76 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 OR1L1Q8NH94 360 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 MRPL37Q9BZE1 423 aaKnown RBP17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 PIPOXQ9P0Z9 390 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 A0A1W2PQM1 296 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 ID1P41134 155 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 LSM6P62312 80 aaKnown RBP17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 LRP11Q86VZ4 500 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 MUC15Q8N387 334 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 UBE2L6O14933 153 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 TM4SF20Q53R12 229 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 RAB40CQ96S21 281 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 RNF115Q9Y4L5 304 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 SNRPGP15A8MWD9 76 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 ADRB1P08588 477 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 VSTM2AQ8TAG5 236 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 C19orf43Q9BQ61 176 aa17.66■□□□□ 0.42
CDC42BPB-201ENST00000361246 FCARP24071 287 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 PCOLCEQ15113 449 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 IGHV3-66A0A0C4DH42 116 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 PGA3P0DJD8 388 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 ANKRD55Q3KP44 614 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 ZBTB44Q8NCP5 570 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 GDF15Q99988 308 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 HIST1H3AP68431 136 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 GPHA2Q96T91 129 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 KLHDC2Q9Y2U9 406 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 HLA-DRB3P79483 266 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 UNQ5815/PRO19632Q6UWF5 114 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 SRXN1Q9BYN0 137 aa17.65■□□□□ 0.42
CDC42BPB-201ENST00000361246 SYNGR1O43759 233 aa17.64■□□□□ 0.42
CDC42BPB-201ENST00000361246 TMEM97Q5BJF2 176 aa17.64■□□□□ 0.42
CDC42BPB-201ENST00000361246 TMEM116Q8NCL8 245 aa17.64■□□□□ 0.42
CDC42BPB-201ENST00000361246 ABHD17AQ96GS6 310 aa17.64■□□□□ 0.42
CDC42BPB-201ENST00000361246 DUX5Q96PT3 197 aa17.64■□□□□ 0.42
CDC42BPB-201ENST00000361246 C17orf51A8MQB3 221 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 IGHV3-48P01763 117 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 HPXP02790 462 aa17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 USF1P22415 310 aaPredicted RBP17.64■□□□□ 0.41
CDC42BPB-201ENST00000361246 CD81P60033 236 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms