RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 FAM120AOSQ5T036 256 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 PRAMEF5Q5TYX0 476 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 METTL11BQ5VVY1 283 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 MRPS7Q9Y2R9 242 aaKnown RBP14.66□□□□□ -0.06
CLK2-202ENST00000361168 SOX21Q9Y651 276 aaPredicted RBP14.66□□□□□ -0.06
CLK2-202ENST00000361168 XRCC3O43542 346 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 SSX5O60225 188 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 HLA-DQB1P01920 261 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 IGHV4-38-2P0DP08 117 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 GUCA2AQ02747 115 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 C11orf91Q3C1V1 193 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 MZT2AQ6P582 158 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 ZNF565Q8N9K5 539 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 CORO2AQ92828 525 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 TNFRSF14Q92956 283 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 PHF21AQ96BD5 680 aa14.66□□□□□ -0.06
CLK2-202ENST00000361168 CMSS1Q9BQ75 279 aaKnown RBP14.66□□□□□ -0.06
CLK2-202ENST00000361168 MEIOCA2RUB1 952 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 C17orf98A8MV24 154 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 FAM25AB3EWG3 89 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 FAM25CB3EWG5 89 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 FAM25GB3EWG6 89 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 C12orf77C9JDV5 145 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 TAS2R20P59543 309 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 TMEM69Q5SWH9 247 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 HACD4Q5VWC8 232 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 PNKDQ8N490 385 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 SETD6Q8TBK2 473 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 DIABLOQ9NR28 239 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 MBNL3Q9NUK0 354 aaKnown RBP14.65□□□□□ -0.06
CLK2-202ENST00000361168 OR6C3Q9NZP0 311 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 JMJD1CQ15652 2540 aa14.65□□□□□ -0.06
CLK2-202ENST00000361168 IGKV1D-8A0A087WSZ0 117 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 A0A1W2PRD5 423 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 A0A1W2PRF3 423 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 A0A1W2PRM7 423 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 MEIS3P1A6NDR6 274 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 RNASEK-C17orf49H0YIS7 233 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 C15orf65H3BRN8 121 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 GATA3P23771 443 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 DYNC1I2Q13409 638 aaKnown RBP14.64□□□□□ -0.07
CLK2-202ENST00000361168 CNPY1Q3B7I2 92 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 CNIH2Q6PI25 160 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 OR1L1Q8NH94 360 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 C22orf15Q8WYQ4 148 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 LEAP2Q969E1 77 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 AUNIPQ9H7T9 357 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 CHMP1AQ9HD42 196 aaPredicted RBP14.64□□□□□ -0.07
CLK2-202ENST00000361168 C12orf4Q9NQ89 552 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 CALYQ9NYX4 217 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 ZNRD1Q9P1U0 126 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 EXTL2Q9UBQ6 330 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 UBE2J1Q9Y385 318 aaPredicted RBP14.64□□□□□ -0.07
CLK2-202ENST00000361168 KPTNQ9Y664 436 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 TRAV40A0A0B4J280 105 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 KBTBD11-OT1A0A1B0GTJ5 212 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 FUOMA2VDF0 154 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 ARFRP1Q13795 201 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 FAM189A2Q15884 450 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 HCP5Q6MZN7 132 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 SNX29P2Q8IUI4 249 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 LHX4Q969G2 390 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 ARL11Q969Q4 196 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 TAF9BQ9HBM6 251 aa14.64□□□□□ -0.07
CLK2-202ENST00000361168 SERPINE3A8MV23 424 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 H3BUI4 141 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 CA11O75493 328 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 IGHV1-8P0DP01 117 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 TNFSF8P32971 234 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 BRD3OSQ6XYD6 125 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 GVQW1Q8N7I0 195 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 KIRREL1Q96J84 757 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 ABHD1Q96SE0 405 aa14.63□□□□□ -0.07
CLK2-202ENST00000361168 METTL8Q9H825 291 aaKnown RBP14.63□□□□□ -0.07
CLK2-202ENST00000361168 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.63□□□□□ -0.07
CLK2-202ENST00000361168 IGHV3-43A0A0B4J1X8 118 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 CENPVL3A0A0U1RRI6 287 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 CLPXO76031 633 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 FCGR3AP08637 254 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 SCTP09683 121 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 IGHV3-43DP0DP04 118 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 HOXB4P17483 251 aaPredicted RBP14.62□□□□□ -0.07
CLK2-202ENST00000361168 RUSC1-AS1Q66K80 236 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 ZNF880Q6PDB4 577 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 KIR3DL3Q8N743 410 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 UPRTQ96BW1 309 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 CMTM3Q96MX0 182 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 NCOR1P1Q9H4R4 102 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 BATF3Q9NR55 127 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 NPIPB11E5RHQ5 1161 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 J3QLI3 93 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 M0R1W7 72 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 HBZP02008 142 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 CD3GP09693 182 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 PRTN3P24158 256 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 COX7A1P24310 79 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 PAX6P26367 422 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 HEPN1Q6WQI6 88 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 DIRAS2Q96HU8 199 aa14.62□□□□□ -0.07
CLK2-202ENST00000361168 ST6GALNAC5Q9BVH7 336 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms