RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 DCAF10Q5QP82 559 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 DHRS13Q6UX07 377 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 OR4P4Q8NGL7 312 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 VAX2Q9UIW0 290 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 OR8B12Q8NGG6 310 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 TLN2Q9Y4G6 2542 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 MOGAT3Q86VF5 341 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 HIVEP2P31629 2446 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 COX6B1P14854 86 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 P2RX4Q99571 388 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 RBBP6Q7Z6E9 1792 aaKnown RBP8.54□□□□□ -1.04
CUX1-203ENST00000360264 PTPRDP23468 1912 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 CSF2RBP32927 897 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 RPS27P42677 84 aaKnown RBP8.54□□□□□ -1.04
CUX1-203ENST00000360264 ZNF658BQ4V348 819 aaPredicted RBP8.54□□□□□ -1.04
CUX1-203ENST00000360264 GBGT1Q8N5D6 347 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 LSMEM1Q8N8F7 131 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 MS4A7Q9GZW8 240 aaPredicted RBP8.54□□□□□ -1.04
CUX1-203ENST00000360264 ASB1Q9Y576 335 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 AHRRA9YTQ3 701 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 C16orf82Q7Z2V1 217 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 SLC35E3Q7Z769 313 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 PTPRFP10586 1907 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 AGFG2O95081 481 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 PRF1P14222 555 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 FBXW9Q5XUX1 488 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 CIRBPQ14011 172 aaKnown RBP8.54□□□□□ -1.04
CUX1-203ENST00000360264 NKG7Q16617 165 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 SLC25A35Q3KQZ1 300 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 COL25A1Q9BXS0 654 aaPredicted RBP8.54□□□□□ -1.04
CUX1-203ENST00000360264 WDR54Q9H977 334 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 COX6CP09669 75 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 FAM106CPP0CH98 169 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 LGALSLQ3ZCW2 172 aaPredicted RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 REC114Q7Z4M0 266 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 SLC6A1P30531 599 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 TSPAN7P41732 249 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 SP6Q3SY56 376 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 B4E171 279 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 HYPMO75409 117 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 LIMK1P53667 647 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 TCF20Q9UGU0 1960 aaKnown RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 FABP4P15090 132 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 ZFP36L2P47974 494 aaKnown RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 HLA-DRB3P79483 266 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 OR5A2Q8NGI9 324 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 PTPMT1Q8WUK0 201 aaPredicted RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 SLIRPQ9GZT3 109 aaKnown RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 ZNF71Q9NQZ8 489 aaPredicted RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 C1orf53Q5VUE5 145 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 PACRGQ96M98 296 aaPredicted RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 SLC25A10Q9UBX3 287 aaPredicted RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 NCOA6Q14686 2063 aaPredicted RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 IGHV1OR15-9A0A0B4J2B8 117 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 CLN8Q9UBY8 286 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 A8MWL6 223 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 M0QZK8 103 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 GGCTO75223 188 aaKnown RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 ZNF735P0CB33 412 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 SLC25A33Q9BSK2 321 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 CLDN18P56856 261 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 PRSS54Q6PEW0 395 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 MRPL30Q8TCC3 161 aaKnown RBP8.53□□□□□ -1.04
CUX1-203ENST00000360264 GPR27Q9NS67 375 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 OR2A4O95047 310 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 TSPOP30536 169 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 GUCA2AQ02747 115 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 RFESDQ8TAC1 157 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 OR2A7Q96R45 310 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 J3QT63 122 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 MPDU1O75352 247 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 MRGPRGQ86SM5 289 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 OR10D4PQ8NGN7 298 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 BOLA1Q9Y3E2 137 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 IGHV5-51A0A0C4DH38 117 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 TCTN1Q2MV58 587 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 PTX4Q96A99 478 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 RAB37Q96AX2 223 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 RASL10BQ96S79 203 aa8.53□□□□□ -1.04
CUX1-203ENST00000360264 F8P00451 2351 aa8.52□□□□□ -1.04
CUX1-203ENST00000360264 DYNLT3P51808 116 aa8.52□□□□□ -1.04
CUX1-203ENST00000360264 HMGA2P52926 109 aa8.52□□□□□ -1.04
CUX1-203ENST00000360264 TCTAP57738 103 aa8.52□□□□□ -1.04
CUX1-203ENST00000360264 COL22A1Q8NFW1 1626 aaPredicted RBP8.52□□□□□ -1.04
CUX1-203ENST00000360264 NAT2P11245 290 aa8.52□□□□□ -1.04
CUX1-203ENST00000360264 RPS20P60866 119 aaKnown RBP8.52□□□□□ -1.04
CUX1-203ENST00000360264 PLA2G3Q9NZ20 509 aa8.52□□□□□ -1.04
CUX1-203ENST00000360264 GCGP01275 180 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 PRR35P0CG20 571 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 CD99P14209 185 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 HOXA6P31267 233 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 B4GALNT1Q00973 533 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 TMEM30BQ3MIR4 351 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 LIPT2A6NK58 231 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 SPANXN1Q5VSR9 72 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 LPAR5Q9H1C0 372 aa8.52□□□□□ -1.05
CUX1-203ENST00000360264 A0A1B0GVG6 124 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms