RNA–Protein interactions for RNA: ENST00000359902.2

CCDC88B-203, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 2,326 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-203ENST00000359902 CLEC18CQ8NCF0 446 aa17.69■□□□□ 0.42
CCDC88B-203ENST00000359902 TRIB1Q96RU8 372 aa17.69■□□□□ 0.42
CCDC88B-203ENST00000359902 CABLES2Q9BTV7 478 aa17.69■□□□□ 0.42
CCDC88B-203ENST00000359902 FAM24AA6NFZ4 105 aa17.68■□□□□ 0.42
CCDC88B-203ENST00000359902 VDAC1P21796 283 aa17.68■□□□□ 0.42
CCDC88B-203ENST00000359902 GABRA6Q16445 453 aa17.68■□□□□ 0.42
CCDC88B-203ENST00000359902 FAM214BQ7L5A3 538 aa17.68■□□□□ 0.42
CCDC88B-203ENST00000359902 OR5D13Q8NGL4 314 aa17.68■□□□□ 0.42
CCDC88B-203ENST00000359902 KIRREL1Q96J84 757 aa17.68■□□□□ 0.42
CCDC88B-203ENST00000359902 SPAARA0A1B0GVQ0 90 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 C9JQL5 133 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 H0Y980 276 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 FTH1P19P0C7X4 201 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 ASCL1P50553 236 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 GUSBP1Q15486 140 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 TMEM88Q6PEY1 159 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 SLC25A40Q8TBP6 338 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 SH3BGRL3Q9H299 93 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 ERRFI1Q9UJM3 462 aaPredicted RBP17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 CD80P33681 288 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 MAGT1Q9H0U3 335 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 PARD6AQ9NPB6 346 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 ASCL3Q9NQ33 180 aa17.67■□□□□ 0.42
CCDC88B-203ENST00000359902 IGSF23A1L1A6 192 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 SNAPINO95295 136 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 OR2H2O95918 312 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 SFTA3P0C7M3 94 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 RAC2P15153 192 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 WT1P19544 449 aaPredicted RBP17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 PVALBP20472 110 aaPredicted RBP17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 F2RP25116 425 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 DVL1P1P54792 670 aaPredicted RBP17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 UCP2P55851 309 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 ID3Q02535 119 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 Q6ZT83 130 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 Q8IYB0 196 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 PLPPR1Q8TBJ4 325 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 IL22RA2Q969J5 263 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 ABHD14BQ96IU4 210 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 TREM2Q9NZC2 230 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 POLDIP2Q9Y2S7 368 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 TRAV39A0A0B4J263 110 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 FAM157AC9JC47 383 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 SIRPB1O00241 398 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 SLC33A1O00400 549 aaPredicted RBP17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 NDUFA2O43678 99 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 SSSCA1O60232 199 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 NPBWR1P48145 328 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 PSG7Q13046 419 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 ZNF154Q13106 437 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 INO80CQ6PI98 192 aaPredicted RBP17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 IGFL2Q6UWQ7 119 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 HSD17B11Q8NBQ5 300 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 IL1F10Q8WWZ1 152 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 OR1A1Q9P1Q5 309 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 CACFD1Q9UGQ2 172 aa17.66■□□□□ 0.42
CCDC88B-203ENST00000359902 CDIPTO14735 213 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 GALR2O43603 387 aaPredicted RBP17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 MDH2P40926 338 aaKnown RBP17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 FHITP49789 147 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 CTAG1AP78358 180 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 ZNF497Q6ZNH5 498 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 OR1J1Q8NGS3 322 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 PLEKHF2Q9H8W4 249 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 IQCF6A8MYZ5 107 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 NPIPB11E5RHQ5 1161 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 TSPAN15O95858 294 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 PGA5P0DJD9 388 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 MIDNQ504T8 468 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 DHRS7BQ6IAN0 325 aaPredicted RBP17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 LYRM2Q9NU23 88 aaPredicted RBP17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 LUZP4Q9P127 313 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 CACNA1HO95180 2353 aa17.65■□□□□ 0.42
CCDC88B-203ENST00000359902 IGHV3-64DA0A0J9YX35 117 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 PROB1E7EW31 1015 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 S100GP29377 79 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 CBLN2Q8IUK8 224 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 TMEM252Q8N6L7 170 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 H0YL77 283 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 C1QL1O75973 258 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 TMEM50AO95807 157 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 H2AFB1P0C5Y9 115 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 KIR2DL2P43627 348 aaPredicted RBP17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 CNEP1R1Q8N9A8 125 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 OR10V1Q8NGI7 309 aa17.64■□□□□ 0.41
CCDC88B-203ENST00000359902 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 SNCAP37840 140 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 CAMLGP49069 296 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 RAB5CP51148 216 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 ZNF616Q08AN1 781 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 CLINT1Q14677 625 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 ZNF146Q15072 292 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 TESK1Q15569 626 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 SHEQ5VZ18 495 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 MOB1BQ7L9L4 216 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 ODF3L1Q8IXM7 274 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 SLC25A31Q9H0C2 315 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 LOC400499M0QZD8 3231 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 AQP7O14520 342 aa17.63■□□□□ 0.41
CCDC88B-203ENST00000359902 NXPH2O95156 264 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms