RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 SSX2Q16385 188 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 MDP1Q86V88 176 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 GAPTQ8N292 157 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 CYYR1Q96J86 154 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 TCEAL7Q9BRU2 100 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 LIME1Q9H400 295 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 ZNF552Q9H707 407 aaPredicted RBP7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 NIT2Q9NQR4 276 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 MTCH1Q9NZJ7 389 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 PURGQ9UJV8 347 aaKnown RBP7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 AMDHD2Q9Y303 409 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 DMDP11532 3685 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 PTPN13Q12923 2485 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 TRIOO75962 3097 aa7.98□□□□□ -1.13
GTF3C2-202ENST00000359541 TECTAO75443 2155 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 MMP9P14780 707 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 CA6P23280 308 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 CD80P33681 288 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 BCL2L2Q92843 193 aaPredicted RBP7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 TMEM56Q96MV1 263 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 NRIP2Q9BQI9 281 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 EIF5A2Q9GZV4 153 aaKnown RBP7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 TMEM231Q9H6L2 316 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 KCNIP1Q9NZI2 227 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 TMEM56-RWDD3S4R434 201 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 SHANK1Q9Y566 2161 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 SCTP09683 121 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 RPL23AP62750 156 aaKnown RBP7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 TP53RKQ96S44 253 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 TRAPPC2LQ9UL33 140 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 PIEZO1Q92508 2521 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 A6NLC8 198 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 RNF212BA8MTL3 300 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 UMAD1C9J7I0 102 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 H0Y980 276 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 SYNGR1O43759 233 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 NXPH2O95156 264 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 H2AFB1P0C5Y9 115 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 LPAR6P43657 344 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 FOXG1P55316 489 aaPredicted RBP7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 BEND4Q6ZU67 534 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 PUSL1Q8N0Z8 303 aaKnown RBP7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 HSD17B11Q8NBQ5 300 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 IL1F10Q8WWZ1 152 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 WDYHV1Q96HA8 205 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 OR2W1Q9Y3N9 320 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 DOCK7Q96N67 2140 aa7.97□□□□□ -1.13
GTF3C2-202ENST00000359541 DNASE2O00115 360 aaPredicted RBP7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 MSTNO14793 375 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 SFTA3P0C7M3 94 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 IDH3GP51553 393 aaPredicted RBP7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 PPP1CBP62140 327 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 BAXQ07812 192 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 COTL1Q14019 142 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 ATRAIDQ6UW56 229 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 CNEP1R1Q8N9A8 125 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 OR52M1Q8NGK5 317 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 GNPNAT1Q96EK6 184 aaPredicted RBP7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 PFDN5Q99471 154 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 TRBV6-6A0A0A6YYG2 114 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 NKX2-6A6NCS4 301 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 SH2D1BO14796 132 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 ADAM20O43506 726 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 HOXB1P14653 301 aaPredicted RBP7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 EWSR1Q01844 656 aaKnown RBP eCLIP7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 GABRA6Q16445 453 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 SUMF1Q8NBK3 374 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 OR5D13Q8NGL4 314 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 GINS3Q9BRX5 216 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 ADAT1Q9BUB4 502 aaKnown RBP7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 KCNS2Q9ULS6 477 aa7.96□□□□□ -1.13
GTF3C2-202ENST00000359541 SSSCA1O60232 199 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 DFFBO76075 338 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 IFNA5P01569 189 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 FABP1P07148 127 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 MUC1P15941 1255 aaPredicted RBP7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 ZNF14P17017 642 aaPredicted RBP7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 UCP1P25874 307 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 CEBPGP53567 150 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 INO80CQ6PI98 192 aaPredicted RBP7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 SLC16A13Q7RTY0 426 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 OR4D5Q8NGN0 318 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 ERGIC1Q969X5 290 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 SARAFQ96BY9 339 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 CCL28Q9NRJ3 127 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 C19orf12Q9NSK7 152 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 LIPGQ9Y5X9 500 aa7.96□□□□□ -1.14
GTF3C2-202ENST00000359541 TMEM210A6NLX4 147 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 SS18L1O75177 396 aaPredicted RBP7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 CNOT4O95628 575 aaKnown RBP7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 PPT1P50897 306 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 MZT1Q08AG7 82 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 OR8G1Q15617 311 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 GUCA2BQ16661 112 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 MIDNQ504T8 468 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 SPATA46Q5T0L3 261 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 BTNL8Q6UX41 500 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 ZNF818PQ6ZRF7 136 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 SSX9Q7RTT3 188 aa7.95□□□□□ -1.14
GTF3C2-202ENST00000359541 SELENOHQ8IZQ5 122 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms