RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 OPA3Q9H6K4 179 aa7.34□□□□□ -1.23
RFX3-202ENST00000358730 MED13Q9UHV7 2174 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 hCG_1809904A0A1W2PP81 198 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 A0A1W2PPE2 198 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 A0A1W2PR64 198 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 A0A1W2PRV1 198 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 CLEC18AA5D8T8 446 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 ARG1P05089 322 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 ZNF14P17017 642 aaPredicted RBP7.33□□□□□ -1.24
RFX3-202ENST00000358730 S100GP29377 79 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 MEOX2P50222 304 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 RUNX1Q01196 453 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 BAXQ07812 192 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 ZNF154Q13106 437 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 RNF212Q495C1 297 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 SOHLH1Q5JUK2 328 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 TMEM251Q8N6I4 163 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 IL22RA1Q8N6P7 574 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 CLEC18CQ8NCF0 446 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 OR51H1Q8NH63 302 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 OR5P3Q8WZ94 311 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 DDA1Q9BW61 102 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 RIMS4Q9H426 269 aaPredicted RBP7.33□□□□□ -1.24
RFX3-202ENST00000358730 PLK3Q9H4B4 646 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 PUS1Q9Y606 427 aaKnown RBP eCLIP7.33□□□□□ -1.24
RFX3-202ENST00000358730 MED12LQ86YW9 2145 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 C19orf67A6NJJ6 358 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 H3BP45 60 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 PGLYRP1O75594 196 aaPredicted RBP7.33□□□□□ -1.24
RFX3-202ENST00000358730 APLNRP35414 380 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 CEBPGP53567 150 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 CCL20P78556 96 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 HLA-DRB3P79483 266 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 ID3Q02535 119 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 PCSK4Q6UW60 755 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 NUFIP2Q7Z417 695 aaKnown RBP7.33□□□□□ -1.24
RFX3-202ENST00000358730 LINC00596Q86U02 117 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 ZNF573Q86YE8 665 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 OR10J5Q8NHC4 309 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 RNASE11Q8TAA1 199 aaKnown RBP7.33□□□□□ -1.24
RFX3-202ENST00000358730 PLPPR1Q8TBJ4 325 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 IL1F10Q8WWZ1 152 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 C12orf49Q9H741 205 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 TUBA4BQ9H853 241 aa7.33□□□□□ -1.24
RFX3-202ENST00000358730 URB1O60287 2271 aaKnown RBP7.33□□□□□ -1.24
RFX3-202ENST00000358730 TRAV24A0A0B4J272 114 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 A0A1B0GW64 132 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 RBFOX3A6NFN3 312 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 OR5B21A6NL26 309 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 CHST1O43916 411 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 EIF3GO75821 320 aaKnown RBP eCLIP7.32□□□□□ -1.24
RFX3-202ENST00000358730 CBR1P16152 277 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 F2RP25116 425 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 WNT5AP41221 380 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 GNG3P63215 75 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 CLN3Q13286 438 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 HIKESHIQ53FT3 197 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 DCAF10Q5QP82 559 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 ODF3L1Q8IXM7 274 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 FAM58AQ8N1B3 248 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 FAM24BQ8N5W8 94 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 SNIP1Q8TAD8 396 aaKnown RBP7.32□□□□□ -1.24
RFX3-202ENST00000358730 IL22RA2Q969J5 263 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 TAAR3PQ9P1P4 343 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 OR2W1Q9Y3N9 320 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 KNTC1P50748 2209 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 A0A0G2JRQ6 117 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 SERPINE2P07093 398 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 MMP9P14780 707 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 RAB5AP20339 215 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 RNPS1Q15287 305 aaKnown RBP7.32□□□□□ -1.24
RFX3-202ENST00000358730 IGFBP7Q16270 282 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 HAGHQ16775 308 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 EIF2S3LQ2VIR3 472 aaKnown RBP7.32□□□□□ -1.24
RFX3-202ENST00000358730 SPATA46Q5T0L3 261 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 AKR1C8PQ5T2L2 129 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 SPSB3Q6PJ21 355 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 STX12Q86Y82 276 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 ZNF561Q8N587 486 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 OR8G5Q8NG78 346 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 GNPNAT1Q96EK6 184 aaPredicted RBP7.32□□□□□ -1.24
RFX3-202ENST00000358730 ATP5SQ99766 215 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 PRSS50Q9UI38 385 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 MPC1Q9Y5U8 109 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 LIPGQ9Y5X9 500 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 R4GN57 208 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 NCOR1O75376 2440 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 GPR179Q6PRD1 2367 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 BTBD17A6NE02 478 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 ARGFXA6NJG6 315 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 RHBDL1O75783 438 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 PSG2P11465 335 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 CA6P23280 308 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 ZNF324BQ6AW86 544 aaPredicted RBP7.32□□□□□ -1.24
RFX3-202ENST00000358730 OR2T2Q6IF00 324 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 PRR18Q8N4B5 295 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 GTF3AQ92664 365 aaKnown RBP7.32□□□□□ -1.24
RFX3-202ENST00000358730 SPRY4Q9C004 299 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 SMDT1Q9H4I9 107 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 DLL3Q9NYJ7 618 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms