RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TAAR3PQ9P1P4 343 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 IGKV1D-13A0A0B4J2D9 117 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 ZNF587BE7ETH6 402 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 IGKV1-13P0DP09 117 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 RND2P52198 227 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 PRDX4Q13162 271 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 YRDCQ86U90 279 aaKnown RBP15.16■□□□□ 0.02
RTN4-204ENST00000357732 IFI44Q8TCB0 444 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 RTTNQ86VV8 2226 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 TRAPPC2LH3BP13 241 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 EPHA1P21709 976 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 FOLR3P41439 243 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 ZNF154Q13106 437 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 TMEM217Q8N7C4 229 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 OR56B2PQ8NGI1 322 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 LSM10Q969L4 123 aaKnown RBP15.16■□□□□ 0.02
RTN4-204ENST00000357732 PARD6GQ9BYG4 376 aaPredicted RBP15.16■□□□□ 0.02
RTN4-204ENST00000357732 CCL28Q9NRJ3 127 aa15.16■□□□□ 0.02
RTN4-204ENST00000357732 IGKV3D-15A0A087WSY6 115 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 ZNF727A8MUV8 499 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 CNOT4O95628 575 aaKnown RBP15.15■□□□□ 0.02
RTN4-204ENST00000357732 CXCL1P09341 107 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 HAAOP46952 286 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 NDUFA6P56556 154 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 ERVFRD-1P60508 538 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 PMS2P11Q13670 270 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 ZNF468Q5VIY5 522 aaPredicted RBP15.15■□□□□ 0.02
RTN4-204ENST00000357732 CPEB3Q8NE35 698 aaKnown RBP15.15■□□□□ 0.02
RTN4-204ENST00000357732 OR5A2Q8NGI9 324 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 MBD3L1Q8WWY6 194 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 OR2W1Q9Y3N9 320 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 RFNGQ9Y644 331 aa15.15■□□□□ 0.02
RTN4-204ENST00000357732 NPIPB11E5RHQ5 1161 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 YIF1AO95070 293 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 CCL4P13236 92 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 SERF2P84101 59 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 RUNX1Q01196 453 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 C1orf87Q8N0U7 546 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 IFITM10A6NMD0 228 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BKO60814 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 CYB5R3P00387 301 aaPredicted RBP15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BJP06899 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BOP23527 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BBP33778 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 CD200P41217 278 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BDP58876 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BCP62807 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST2H2BEQ16778 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.14■□□□□ 0.01
RTN4-204ENST00000357732 ZNF880Q6PDB4 577 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 PCSK4Q6UW60 755 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BHQ93079 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 APOBEC3DQ96AK3 386 aaPredicted RBP15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BNQ99877 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 HIST1H2BMQ99879 126 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 CABLES2Q9BTV7 478 aa15.14■□□□□ 0.01
RTN4-204ENST00000357732 TNRC6AQ8NDV7 1962 aaKnown RBP15.14■□□□□ 0.01
RTN4-204ENST00000357732 IGKV1-6A0A0C4DH72 117 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 LRRC3CA6NJW4 275 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 CLDN34H7C241 214 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 PPP1R2P9O14990 202 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 SERPINE2P07093 398 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 BCL2P10415 239 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 RPS18P62269 152 aaKnown RBP15.13■□□□□ 0.01
RTN4-204ENST00000357732 NKX6-1P78426 367 aaPredicted RBP15.13■□□□□ 0.01
RTN4-204ENST00000357732 PYY3Q5JQD4 70 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 OR2B11Q5JQS5 317 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 SLC25A24Q6NUK1 477 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 MRPL21Q7Z2W9 205 aaKnown RBP15.13■□□□□ 0.01
RTN4-204ENST00000357732 SCGB1C1Q8TD33 95 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 CTDSP1Q9GZU7 261 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 KIAA1324LA8MWY0 1029 aaPredicted RBP15.13■□□□□ 0.01
RTN4-204ENST00000357732 DEGS1O15121 323 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 SS18L1O75177 396 aaPredicted RBP15.13■□□□□ 0.01
RTN4-204ENST00000357732 NDUFS6O75380 124 aaKnown RBP15.13■□□□□ 0.01
RTN4-204ENST00000357732 CEBPGP53567 150 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 FAM90A2PQ658T7 463 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 NEK7Q8TDX7 302 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 CALHM2Q9HA72 323 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 MTCH1Q9NZJ7 389 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 NOSIPQ9Y314 301 aaKnown RBP15.13■□□□□ 0.01
RTN4-204ENST00000357732 SIT1Q9Y3P8 196 aa15.13■□□□□ 0.01
RTN4-204ENST00000357732 CYB5BO43169 146 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 ZNF324BQ6AW86 544 aaPredicted RBP15.12■□□□□ 0.01
RTN4-204ENST00000357732 THNSL2Q86YJ6 484 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 OR10J5Q8NHC4 309 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 MRPL30Q8TCC3 161 aaKnown RBP15.12■□□□□ 0.01
RTN4-204ENST00000357732 PINX1Q96BK5 328 aaKnown RBP15.12■□□□□ 0.01
RTN4-204ENST00000357732 A0A0G2JMM0 328 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 A0A1W2PPB8 328 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 A0A1W2PRS3 328 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 KIR3DP1A8MWS1 328 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 NTN3O00634 580 aaPredicted RBP15.12■□□□□ 0.01
RTN4-204ENST00000357732 MRPL33O75394 65 aaKnown RBP15.12■□□□□ 0.01
RTN4-204ENST00000357732 GPM6AP51674 278 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 GFRA1P56159 465 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 HBG1P69891 147 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 HBG2P69892 147 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 ZNF343Q6P1L6 599 aa15.12■□□□□ 0.01
RTN4-204ENST00000357732 GPR146Q96CH1 333 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms