RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 FOXF2Q12947 444 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 KIAA0141Q14154 515 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 CEACAM16Q2WEN9 425 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 SOHLH1Q5JUK2 328 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 HIST2H3PS2Q5TEC6 136 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 SPSB3Q6PJ21 355 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 GFRALQ6UXV0 394 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 ZNF100Q8IYN0 542 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 RTN4IP1Q8WWV3 396 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 SYT3Q9BQG1 590 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 HDHD3Q9BSH5 251 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 UNKLQ9H9P5 680 aaKnown RBP10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 BCO1Q9HAY6 547 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 PLEKHJ1Q9NW61 149 aa10.86□□□□□ -0.67
RTFDC1-202ENST00000357348 BTBD17A6NE02 478 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 ST8SIA3O43173 380 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 PRH1P02810 166 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 OR13C7P0DN81 318 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 NR2C1P13056 603 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 B4GALT1P15291 398 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 KRTCAP3Q53RY4 240 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 SUMF2Q8NBJ7 301 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 AKR7LQ8NHP1 331 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 APH1AQ96BI3 265 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 PARPBPQ9NWS1 579 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 CXorf65A6NEN9 183 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 HSD17B6O14756 317 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 DIRAS3O95661 229 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 PATE4P0C8F1 98 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 TMEM225BP0DP42 221 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 MSR1P21757 451 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 NHLH2Q02577 135 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 KLRB1Q12918 225 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 RSPO1Q2MKA7 263 aaPredicted RBP10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 VWA1Q6PCB0 445 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 ASCL4Q6XD76 172 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 LGI3Q8N145 548 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 OR52M1Q8NGK5 317 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 MARS2Q96GW9 593 aaKnown RBP10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 BOD1Q96IK1 185 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 NELFAQ9H3P2 528 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 IGSF10Q6WRI0 2623 aa10.85□□□□□ -0.67
RTFDC1-202ENST00000357348 MYO7BQ6PIF6 2116 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 A0A096LPE4 126 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 A0A1W2PPZ6 126 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 RBFOX3A6NFN3 312 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 AHRRA9YTQ3 701 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 XRCC2O43543 280 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 SRP19P09132 144 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 EWSR1Q01844 656 aaKnown RBP eCLIP10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 SP6Q3SY56 376 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 DMRTC1Q5HYR2 192 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 C10orf128Q5T292 105 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 FBXW12Q6X9E4 464 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 TMEM182Q6ZP80 229 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 SEM1Q6ZVN7 128 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 NPRL2Q8WTW4 380 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 RARRES2Q99969 163 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 SIRT7Q9NRC8 400 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 DOK5Q9P104 306 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 KIAA1456Q9P272 454 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 AK3Q9UIJ7 227 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 FAM215AQ9Y5M1 114 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 ZNF724A8MTY0 619 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 YIF1AO95070 293 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 FAHP16930 419 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 GPX4P36969 197 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 ENDOGQ14249 297 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 ELOBQ15370 118 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 PCSK4Q6UW60 755 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 HSD17B11Q8NBQ5 300 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 TMEM45BQ96B21 275 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 GMPPAQ96IJ6 420 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 SLC2A9Q9NRM0 540 aa10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 GAR1Q9NY12 217 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 PUS1Q9Y606 427 aaKnown RBP eCLIP10.84□□□□□ -0.67
RTFDC1-202ENST00000357348 SHANK1Q9Y566 2161 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 F5H5K5 113 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 H3BQ15 152 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 PITX3O75364 302 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 GABRR1P24046 479 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 RPS10P46783 165 aaKnown RBP10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 CCL20P78556 96 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 ZNF266Q14584 549 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 ABCA11PQ4W5N1 156 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 FBXL14Q8N1E6 418 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 NAXEQ8NCW5 288 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 GJC3Q8NFK1 279 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 OR13D1Q8NGV5 346 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 NABP1Q96AH0 204 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 SPSB1Q96BD6 273 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 MOB3AQ96BX8 217 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 RAB39BQ96DA2 213 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 FOXB1Q99853 325 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 METTL9Q9H1A3 318 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 EPG5Q9HCE0 2579 aa10.83□□□□□ -0.68
RTFDC1-202ENST00000357348 PRR14LQ5THK1 2151 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms