RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 PSG2P11465 335 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 SCAND1P57086 179 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 HOXA4Q00056 320 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 COL19A1Q14993 1142 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 PLPPR5Q32ZL2 321 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 C19orf54Q5BKX5 351 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 WDR25Q64LD2 544 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 MRPL30Q8TCC3 161 aaKnown RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 PCGF1Q9BSM1 259 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 SLC26A1Q9H2B4 701 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 AHDC1Q5TGY3 1603 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 PITX3O75364 302 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 DDTP30046 118 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 FAM3BP58499 235 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 HFEQ30201 348 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 LINC00469Q8N7U9 141 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 OR4C13Q8NGP0 309 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 MYEOVQ96EZ4 313 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 CCL28Q9NRJ3 127 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 THYN1Q9P016 225 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 IL36RNQ9UBH0 155 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 IGKV3D-15A0A087WSY6 115 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 TRBV5-4A0A0C4DH59 114 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 IGKV3-15P01624 115 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 FZD5Q13467 585 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 OR8I2Q8N0Y5 310 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 FOXJ2Q9P0K8 574 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 COL25A1Q9BXS0 654 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 ASCC3Q8N3C0 2202 aaKnown RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 TRGV5A0A0B4J1U4 118 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 TMPRSS2O15393 492 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 RELQ04864 619 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 FOXO1Q12778 655 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 ADTRPQ96IZ2 230 aa9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 DNAJB12Q9NXW2 375 aaKnown RBP9.72□□□□□ -0.85
GTF3C1-201ENST00000356183 C7orf71A4D174 169 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 PLPP3O14495 311 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 NMBP08949 121 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 HOXA6P31267 233 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 PMELP40967 661 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 NPBWR2P48146 333 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 RNF133Q8WVZ7 376 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 SPAG8Q99932 426 aaPredicted RBP9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 FRRS1LQ9P0K9 344 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 IGHV3OR15-7A0A075B7D8 119 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 CGB1A6NKQ9 187 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 KLK2P20151 261 aa9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 ZNF764Q96H86 408 aaPredicted RBP9.71□□□□□ -0.85
GTF3C1-201ENST00000356183 A0A1W2PPC4 97 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 LGALS3P17931 250 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 CAPZBP47756 277 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 SGMS2Q8NHU3 365 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 EID2BQ96D98 161 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 FOXC2Q99958 501 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 ZPBPQ9BS86 351 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 CXCL2P19875 107 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 IZUMO4Q1ZYL8 232 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 ASB10Q8WXI3 467 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 HDHD3Q9BSH5 251 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 OR51M1Q9H341 326 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 UQCR10Q9UDW1 63 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 RAXQ9Y2V3 346 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 TRAV8-7A0A075B6U6 113 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 TMEM189A5PLL7 270 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 CYB5R3P00387 301 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 SUMO3P55854 103 aaPredicted RBP9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 GFRA1P56159 465 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 PIGYQ3MUY2 71 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 OR4D9Q8NGE8 314 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 RTN4RQ9BZR6 473 aa9.71□□□□□ -0.86
GTF3C1-201ENST00000356183 ZNF770Q6IQ21 691 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 FAHD2BQ6P2I3 314 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 A0A1B0GV72 72 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 MFAP2P55001 183 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 KLF3P57682 345 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 FAM90A27PA6NNH2 459 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 AMY1AP04745 511 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 MTURNQ8N3F0 131 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 OR8G5Q8NG78 346 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 FAM216AQ8WUB2 273 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 GUCD1Q96NT3 240 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 PAXXQ9BUH6 204 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 PHIPQ8WWQ0 1821 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 ATP6V0CP27449 155 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 ID4P47928 161 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 MRPS11P82912 194 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 KLF9Q13886 244 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 PTCRAQ6ISU1 281 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 FBXO46Q6PJ61 603 aaPredicted RBP9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 C12orf54Q6X4T0 127 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 AMER3Q8N944 861 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 Q8WTZ3 238 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 PARLQ9H300 379 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 PPP1R3EQ9H7J1 279 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 RABAC1Q9UI14 185 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 MRM2Q9UI43 246 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 NTN1O95631 604 aa9.7□□□□□ -0.86
GTF3C1-201ENST00000356183 EIF3IQ13347 325 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms