RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ZNF426Q9BUY5 554 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 SMCHD1A6NHR9 2005 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 DUXBA0A1W2PPF3 345 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 RGS13O14921 159 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 DNPH1O43598 174 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 PRSS1P07477 247 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 MGPP08493 103 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 PRDX2P32119 198 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 NAT8Q9UHE5 227 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 V9GYH0 126 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 USP54Q70EL1 1684 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 TRBV23-1A0A0A0MS06 115 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 PRSS23O95084 383 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 CLDN14O95500 239 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 WNT5AP41221 380 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 IQCJQ1A5X6 159 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 ANKRD55Q3KP44 614 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 FDX2Q6P4F2 183 aa11.53□□□□□ -0.56
SCN8A-202ENST00000355133 P01737 135 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 MBPP02686 304 aaPredicted RBP11.52□□□□□ -0.56
SCN8A-202ENST00000355133 C1QCP02747 245 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 CRHP06850 196 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 CCKARP32238 428 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 UCNP55089 124 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 GGTLC2Q14390 218 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 C11orf91Q3C1V1 193 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 MIXL1Q9H2W2 232 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 HMSDA8MTL9 139 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 FAM157CP0CG43 387 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 SFTPCP11686 197 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 BSXQ3C1V8 233 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 SLC25A42Q86VD7 318 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 TMEM251Q8N6I4 163 aa11.52□□□□□ -0.56
SCN8A-202ENST00000355133 WDR73Q6P4I2 378 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 VWA1Q6PCB0 445 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 PHYHIPLQ96FC7 376 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 LPAR5Q9H1C0 372 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 DOLPP1Q86YN1 238 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 P2RX4Q99571 388 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 MS4A7Q9GZW8 240 aaPredicted RBP11.52□□□□□ -0.57
SCN8A-202ENST00000355133 HILPDAQ9Y5L2 63 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 OR51B2Q9Y5P1 312 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 PSG4Q00888 419 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 EWSR1Q01844 656 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCN8A-202ENST00000355133 KCNMB1Q16558 191 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 TEX30Q5JUR7 227 aa11.52□□□□□ -0.57
SCN8A-202ENST00000355133 COL8A1P27658 744 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 TMEM50BP56557 158 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.51□□□□□ -0.57
SCN8A-202ENST00000355133 PGLYRP3Q96LB9 341 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 RCC2Q9P258 522 aaKnown RBP11.51□□□□□ -0.57
SCN8A-202ENST00000355133 M0R2Z0 102 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 CXCL3P19876 107 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 OR10G8Q8NGN5 311 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 OR1L8Q8NGR8 309 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 PERPQ96FX8 193 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 SEC11CQ9BY50 192 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 PTBP3O95758 552 aaKnown RBP11.51□□□□□ -0.57
SCN8A-202ENST00000355133 LINC00596Q86U02 117 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 IGKV1-8A0A0C4DH67 115 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 J3QR06 171 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 UCP2P55851 309 aa11.51□□□□□ -0.57
SCN8A-202ENST00000355133 EAF1Q96JC9 268 aaPredicted RBP11.51□□□□□ -0.57
SCN8A-202ENST00000355133 TMSB15BA0A087X1C1 80 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 CBY3A6NI87 242 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 MFNGO00587 321 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 PAGE4O60829 102 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 NPY1RP25929 384 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 ATG2BQ96BY7 2078 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 PTP4A3O75365 173 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 RHBDL1O75783 438 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 TTRP02766 147 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 SULT1A1P50225 295 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 RBM11P57052 281 aaKnown RBP11.5□□□□□ -0.57
SCN8A-202ENST00000355133 B2MP61769 119 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 C19orf57Q0VDD7 668 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 MRPL54Q6P161 138 aaKnown RBP11.5□□□□□ -0.57
SCN8A-202ENST00000355133 RFLNBQ8N5W9 214 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 SRSF10O75494 262 aaKnown RBP11.5□□□□□ -0.57
SCN8A-202ENST00000355133 KIR3DL2P43630 455 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 MMP16P51512 607 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 TMEM91Q6ZNR0 172 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 FAM214BQ7L5A3 538 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 SCMH1Q96GD3 660 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 PRO1933Q9H354 126 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 Q9N2K0 584 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 CYB5R1Q9UHQ9 305 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 IGSF23A1L1A6 192 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 COX6B1P14854 86 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 OR10C1Q96KK4 312 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 IGF2P01344 180 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 SNRPCP09234 159 aaKnown RBP11.5□□□□□ -0.57
SCN8A-202ENST00000355133 DAOP14920 347 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 NANOS3P60323 173 aaKnown RBP11.5□□□□□ -0.57
SCN8A-202ENST00000355133 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 C8orf82Q6P1X6 216 aaPredicted RBP11.5□□□□□ -0.57
SCN8A-202ENST00000355133 SLC25A45Q8N413 288 aa11.5□□□□□ -0.57
SCN8A-202ENST00000355133 OR2T10Q8NGZ9 312 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms