RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NCOA6Q14686 2063 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-201ENST00000352993 A6NCN8 305 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 CBY3A6NI87 242 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 TLX3O43711 291 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-201ENST00000352993 GYPAP02724 150 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 SERPINE2P07093 398 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 EFNA3P52797 238 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 KRTDAPP60985 99 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 PMP22Q01453 160 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 MEF2BQ02080 365 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-201ENST00000352993 GAGE1Q13065 139 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 SPANXN5Q5MJ07 72 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 WDR5BQ86VZ2 330 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 BAGE3Q86Y29 109 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 BAGE2Q86Y30 109 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 MAML2Q8IZL2 1156 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-201ENST00000352993 OR10G4Q8NGN3 311 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 ZCCHC14Q8WYQ9 949 aaKnown RBP6.59□□□□□ -1.35
BRCA1-201ENST00000352993 PP6455Q8WZ26 134 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 LYZL4Q96KX0 146 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 HSPB9Q9BQS6 159 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 PARLQ9H300 379 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM9BQ9NQ34 198 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 MANBALQ9NQG1 85 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 RYDENQ9NUL5 291 aaKnown RBP6.59□□□□□ -1.35
BRCA1-201ENST00000352993 RALGAPA1Q6GYQ0 2036 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF816-ZNF321PA0A0X1KG74 233 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 BLACEA4D250 179 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 GALR2O43603 387 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-201ENST00000352993 GCH1P30793 250 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 CLDN17P56750 224 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 CYP2G1PQ6ZSU1 146 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 OR13H1Q8NG92 308 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF721Q8TF20 911 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 BTF3L4Q96K17 158 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 P2RX4Q99571 388 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 ZDHHC11Q9H8X9 412 aa6.59□□□□□ -1.35
BRCA1-201ENST00000352993 UBE2L5PA0A1B0GUS4 154 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 NUPR1O60356 82 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 TSPAN2O60636 221 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 KBTBD11O94819 623 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 EGR1P18146 543 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 VDAC1P21796 283 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 DTYMKP23919 212 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 MSX1P28360 303 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 PLA2G5P39877 138 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 COA6Q5JTJ3 125 aaKnown RBP6.58□□□□□ -1.36
BRCA1-201ENST00000352993 CISD2Q8N5K1 135 aaKnown RBP6.58□□□□□ -1.36
BRCA1-201ENST00000352993 C22orf15Q8WYQ4 148 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 CCDC74BQ96LY2 380 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 CCL28Q9NRJ3 127 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 PSENENQ9NZ42 101 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 ANKUB1A6NFN9 424 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 CD300LBA8K4G0 201 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 FOXI3A8MTJ6 420 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-201ENST00000352993 M0R135 149 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 CRYABP02511 175 aaKnown RBP6.58□□□□□ -1.36
BRCA1-201ENST00000352993 S100GP29377 79 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 TPPP2P59282 170 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 PPP1CBP62140 327 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 MMDQ15546 238 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 ACTL10Q5JWF8 245 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 TCF23Q7RTU1 214 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 OSR2Q8N2R0 312 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 D2HGDHQ8N465 521 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 OR1K1Q8NGR3 316 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 GATAD1Q8WUU5 269 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF799Q96GE5 643 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 RNF208Q9H0X6 261 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 ALKBH4Q9NXW9 302 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 WNT16Q9UBV4 365 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 KIR2DS5A0A0G2JLQ3 304 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 KIR2DL5BA0A0G2JN68 375 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 A0A0G2JNG1 304 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 KIR2DL5BA0A0G2JPC4 375 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 LIPT2A6NK58 231 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 KIR2DS3K7RE56 304 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 NTSR1P30989 418 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 CARD18P57730 90 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 RPS16P62249 146 aaKnown RBP6.58□□□□□ -1.36
BRCA1-201ENST00000352993 ZP4Q12836 540 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 KIR2DS5Q14953 304 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF726P1Q15940 193 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 SAPCD1Q5SSQ6 148 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 ABLIM2Q6H8Q1 611 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 KIR2DL5AQ8N109 375 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 OR5L2Q8NGL0 311 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF385AQ96PM9 386 aaKnown RBP6.58□□□□□ -1.36
BRCA1-201ENST00000352993 DECR2Q9NUI1 292 aa6.58□□□□□ -1.36
BRCA1-201ENST00000352993 DUXBA0A1W2PPF3 345 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 A0A1W2PQD3 144 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 GFERP55789 205 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 UBE2G2P60604 165 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 HBG1P69891 147 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 HBG2P69892 147 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 EXT1Q16394 746 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 TMEM196Q5HYL7 178 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 ZNF818PQ6ZRF7 136 aa6.57□□□□□ -1.36
BRCA1-201ENST00000352993 RNASE8Q8TDE3 154 aaKnown RBP6.57□□□□□ -1.36
BRCA1-201ENST00000352993 PIGCQ92535 297 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms