RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
TRAF3-202ENST00000351691 ADIRFQ15847 76 aa12.87□□□□□ -0.35
TRAF3-202ENST00000351691 SLC25A53Q5H9E4 307 aa12.87□□□□□ -0.35
TRAF3-202ENST00000351691 ANKRD37Q7Z713 158 aa12.87□□□□□ -0.35
TRAF3-202ENST00000351691 UEVLDQ8IX04 471 aa12.87□□□□□ -0.35
TRAF3-202ENST00000351691 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
TRAF3-202ENST00000351691 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-202ENST00000351691 RNF115Q9Y4L5 304 aa12.87□□□□□ -0.35
TRAF3-202ENST00000351691 ARID1BQ8NFD5 2236 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-202ENST00000351691 E9PLN8 166 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 ADAM20O43506 726 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 GLI4P10075 376 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 PAX9P55771 341 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 LCN2P80188 198 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 ZNF92Q03936 586 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 HIST3H3Q16695 136 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 TMEM211Q6ICI0 200 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 SUMF1Q8NBK3 374 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 OR2T10Q8NGZ9 312 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 MIEN1Q9BRT3 115 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 REPIN1Q9BWE0 567 aaKnown RBP12.86□□□□□ -0.35
TRAF3-202ENST00000351691 MAP1LC3B2A6NCE7 125 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 CEBPZOSA8MTT3 80 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 CHST1O43916 411 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 PPYP01298 95 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 MMP7P09237 267 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-202ENST00000351691 FAHP16930 419 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 ERVS71-1P61550 626 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 RPL23P62829 140 aaKnown RBP12.86□□□□□ -0.35
TRAF3-202ENST00000351691 ZNF726P1Q15940 193 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 ARSJQ5FYB0 599 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-202ENST00000351691 WDR5BQ86VZ2 330 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 SCGB1C1Q8TD33 95 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 PIGTQ969N2 578 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 PINX1Q96BK5 328 aaKnown RBP12.86□□□□□ -0.35
TRAF3-202ENST00000351691 PCGF1Q9BSM1 259 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 MAP1LC3BQ9GZQ8 125 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 MAGT1Q9H0U3 335 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 OR51I2Q9H344 312 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 PIGLQ9Y2B2 252 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
TRAF3-202ENST00000351691 VSTM2BA6NLU5 285 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 TNFSF13O75888 250 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 HPRT1P00492 218 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 SLC25A6P12236 298 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 CDAP32320 146 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 TNFSF10P50591 281 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 TMEM217Q8N7C4 229 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 TMEM37Q8WXS4 190 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 ZNF160Q9HCG1 818 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 FUT9Q9Y231 359 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 MUC3AQ02505 3323 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 YLPM1P49750 1951 aaKnown RBP12.85□□□□□ -0.35
TRAF3-202ENST00000351691 EXPH5Q8NEV8 1989 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 IGLV3-32A0A0A0MS00 114 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 BRS3P32247 399 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 RPL29P47914 159 aaKnown RBP12.85□□□□□ -0.35
TRAF3-202ENST00000351691 UBE2NP61088 152 aaKnown RBP12.85□□□□□ -0.35
TRAF3-202ENST00000351691 Q6ZS49 121 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 TBC1D26Q86UD7 250 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 SLC25A45Q8N413 288 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 MRGPRX4Q96LA9 322 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 ASCL3Q9NQ33 180 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 IL36GQ9NZH8 169 aa12.85□□□□□ -0.35
TRAF3-202ENST00000351691 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 TUBG1P23258 451 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 GNRHRP30968 328 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 MDH2P40926 338 aaKnown RBP12.84□□□□□ -0.35
TRAF3-202ENST00000351691 ZNF41P51814 821 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-202ENST00000351691 FBXW4P57775 412 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 MFAP5Q13361 173 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 SRSF7Q16629 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAF3-202ENST00000351691 TMEM41BQ5BJD5 291 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 SLC25A24Q6NUK1 477 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 KCNIP4Q6PIL6 250 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 ZNF705AQ6ZN79 300 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-202ENST00000351691 ABCA7Q8IZY2 2146 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 DTD1Q8TEA8 209 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 ZCCHC14Q8WYQ9 949 aaKnown RBP12.84□□□□□ -0.35
TRAF3-202ENST00000351691 RAB40CQ96S21 281 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 TRAF3IP2O43734 574 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-202ENST00000351691 VENTXO95231 258 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 IL6RP08887 468 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-202ENST00000351691 LCN15Q6UWW0 184 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 AGBL5Q8NDL9 886 aa12.84□□□□□ -0.35
TRAF3-202ENST00000351691 C5orf63A6NC05 138 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 ZNF737O75373 536 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 ZNF205O95201 554 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 IRF2P14316 349 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 OTX1P32242 354 aaPredicted RBP12.83□□□□□ -0.36
TRAF3-202ENST00000351691 GNB2P62879 340 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 MEF2BQ02080 365 aaPredicted RBP12.83□□□□□ -0.36
TRAF3-202ENST00000351691 GJC3Q8NFK1 279 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 OR5D13Q8NGL4 314 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 THOC3Q96J01 351 aaKnown RBP12.83□□□□□ -0.36
TRAF3-202ENST00000351691 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 PLK3Q9H4B4 646 aa12.83□□□□□ -0.36
TRAF3-202ENST00000351691 GPR35Q9HC97 309 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms