RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PUS1Q9Y606 427 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM4-201ENST00000349062 COLCA2A8K830 154 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 IL2RAP01589 272 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 CEACAM21Q3KPI0 293 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 SLC5A7Q9GZV3 580 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 ZNF107Q9UII5 783 aaPredicted RBP11.87□□□□□ -0.51
TRIM4-201ENST00000349062 URGCP-MRPS24S4R325 110 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 TRAV17A0A0B4J275 112 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 ZNF724A8MTY0 619 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 DEGS1O15121 323 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 C1QL1O75973 258 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 MPV17P39210 176 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 FHITP49789 147 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 ZNF83P51522 516 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 FOXC1Q12948 553 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 TMEM268Q5VZI3 342 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 C20orf204Q6ZNR8 217 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 BCL2L2Q92843 193 aaPredicted RBP11.87□□□□□ -0.51
TRIM4-201ENST00000349062 C10orf35Q96D05 121 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 C1orf123Q9NWV4 160 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 KALRNO60229 2985 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 SLC34A2O95436 690 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 S100A12P80511 92 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 ARL6IP1Q15041 203 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 PIP4P1Q86T03 277 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 LINC00470Q9BZP3 86 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 CCL28Q9NRJ3 127 aa11.87□□□□□ -0.51
TRIM4-201ENST00000349062 TIMM8AO60220 97 aaPredicted RBP11.86□□□□□ -0.51
TRIM4-201ENST00000349062 TK1P04183 234 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 RPS10P46783 165 aaKnown RBP11.86□□□□□ -0.51
TRIM4-201ENST00000349062 CAV2P51636 162 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 CYCSP99999 105 aaKnown RBP11.86□□□□□ -0.51
TRIM4-201ENST00000349062 TCF15Q12870 199 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 TMEM42Q69YG0 159 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 SUMF2Q8NBJ7 301 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 CYTL1Q9NRR1 136 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
TRIM4-201ENST00000349062 A0A1W2PPE2 198 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 FOXI3A8MTJ6 420 aaPredicted RBP11.86□□□□□ -0.51
TRIM4-201ENST00000349062 TM4SF5O14894 197 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 FGF16O43320 207 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 FAM157CP0CG43 387 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 PPA1Q15181 289 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 LHFPL1Q86WI0 220 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 FAM58AQ8N1B3 248 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 HIST1H2BAQ96A08 127 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 ZNF251Q9BRH9 671 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 TRAPPC2LQ9UL33 140 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 PPP1R3CQ9UQK1 317 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 COL12A1Q99715 3063 aa11.86□□□□□ -0.51
TRIM4-201ENST00000349062 C7orf77A4D0Y5 90 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 CDRT15L2A8MXV6 281 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 H3BP45 60 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 WDR1O75083 606 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 YIF1AO95070 293 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 PPYP01298 95 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 H2AFB1P0C5Y9 115 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 ALDH3B1P43353 468 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 GNG3P63215 75 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 MRPL49Q13405 166 aaKnown RBP11.85□□□□□ -0.51
TRIM4-201ENST00000349062 MST1LQ2TV78 715 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 EIF5AL1Q6IS14 154 aaKnown RBP11.85□□□□□ -0.51
TRIM4-201ENST00000349062 ZADH2Q8N4Q0 377 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 HSD17B11Q8NBQ5 300 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 RFESDQ8TAC1 157 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 MMP24Q9Y5R2 645 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 OR8G1Q15617 311 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 GAPTQ8N292 157 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 TMEM217Q8N7C4 229 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 OR52M1Q8NGK5 317 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 TP53RKQ96S44 253 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 RNF122Q9H9V4 155 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 COL27A1Q8IZC6 1860 aaPredicted RBP11.85□□□□□ -0.51
TRIM4-201ENST00000349062 IGKV1D-13A0A0B4J2D9 117 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 IGKV1-13P0DP09 117 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 BMP5P22003 454 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 EDDM3AQ14507 147 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 TCTEX1D2Q8WW35 142 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 ASB13Q8WXK3 278 aa11.85□□□□□ -0.51
TRIM4-201ENST00000349062 RBMXL1Q96E39 390 aaKnown RBP11.85□□□□□ -0.51
TRIM4-201ENST00000349062 ERRFI1Q9UJM3 462 aaPredicted RBP11.85□□□□□ -0.51
TRIM4-201ENST00000349062 H7C1Q1 480 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 K7EPK0 472 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 ZNF695Q8IW36 515 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 FAM71E2Q8N5Q1 922 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 BSCL2Q96G97 398 aaPredicted RBP11.84□□□□□ -0.51
TRIM4-201ENST00000349062 GMPPAQ96IJ6 420 aaPredicted RBP11.84□□□□□ -0.51
TRIM4-201ENST00000349062 CAMLGP49069 296 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 NDUFA6P56556 154 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 PSG7Q13046 419 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 MIDNQ504T8 468 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 IL34Q6ZMJ4 242 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 SNIP1Q8TAD8 396 aaKnown RBP11.84□□□□□ -0.51
TRIM4-201ENST00000349062 ZDHHC11Q9H8X9 412 aa11.84□□□□□ -0.51
TRIM4-201ENST00000349062 OR1A1Q9P1Q5 309 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms