RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ALKBH4Q9NXW9 302 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 WNT16Q9UBV4 365 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 ST3GAL6Q9Y274 331 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 TRAPPC1Q9Y5R8 145 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 MYO15AQ9UKN7 3530 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 UNC13CQ8NB66 2214 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 A0A0U1RQK1 487 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 ZNF320A2RRD8 509 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 GRIFINA4D1Z8 144 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 TNFRSF10CO14798 259 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 EFNA2O43921 213 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 OR7C1O76099 320 aaPredicted RBP13.22□□□□□ -0.29
LMNA-201ENST00000347559 NTSR1P30989 418 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 MEF2BQ02080 365 aaPredicted RBP13.22□□□□□ -0.29
LMNA-201ENST00000347559 ZNF845Q96IR2 970 aaPredicted RBP13.22□□□□□ -0.29
LMNA-201ENST00000347559 PARLQ9H300 379 aa13.22□□□□□ -0.29
LMNA-201ENST00000347559 H3BMH7 237 aa13.21□□□□□ -0.29
LMNA-201ENST00000347559 KBTBD11O94819 623 aa13.21□□□□□ -0.29
LMNA-201ENST00000347559 CRYABP02511 175 aaKnown RBP13.21□□□□□ -0.29
LMNA-201ENST00000347559 GCH1P30793 250 aa13.21□□□□□ -0.29
LMNA-201ENST00000347559 KIR2DL1P43626 348 aaPredicted RBP13.21□□□□□ -0.29
LMNA-201ENST00000347559 GATAD1Q8WUU5 269 aa13.21□□□□□ -0.29
LMNA-201ENST00000347559 IGKV1-27A0A075B6S5 117 aa13.21□□□□□ -0.3
LMNA-201ENST00000347559 IGHV5-51A0A0C4DH38 117 aa13.21□□□□□ -0.3
LMNA-201ENST00000347559 A0A1W2PNV4 684 aa13.21□□□□□ -0.3
LMNA-201ENST00000347559 PDGFBP01127 241 aaPredicted RBP13.21□□□□□ -0.3
LMNA-201ENST00000347559 VDAC1P21796 283 aa13.21□□□□□ -0.3
LMNA-201ENST00000347559 COTL1Q14019 142 aa13.21□□□□□ -0.3
LMNA-201ENST00000347559 SLC25A47Q6Q0C1 308 aa13.21□□□□□ -0.3
LMNA-201ENST00000347559 POC1BQ8TC44 478 aa13.21□□□□□ -0.3
LMNA-201ENST00000347559 MRPL30Q8TCC3 161 aaKnown RBP13.21□□□□□ -0.3
LMNA-201ENST00000347559 ZCCHC14Q8WYQ9 949 aaKnown RBP13.21□□□□□ -0.3
LMNA-201ENST00000347559 PATZ1Q9HBE1 687 aaKnown RBP13.21□□□□□ -0.3
LMNA-201ENST00000347559 LILRA1O75019 489 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 MSX1P28360 303 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 MALLQ13021 153 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 SNAI3Q3KNW1 292 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 Q6ZPA2 131 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 BORCS8Q96FH0 119 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 ZNF385AQ96PM9 386 aaKnown RBP13.2□□□□□ -0.3
LMNA-201ENST00000347559 MIEN1Q9BRT3 115 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 PLEK2Q9NYT0 353 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 FOXJ2Q9P0K8 574 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 SLC22A18ASQ8N1D0 253 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 VN1R17PQ8TDU5 208 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 ST8SIA1Q92185 356 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 TMEM56Q96MV1 263 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 RNF208Q9H0X6 261 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 TMEM56-RWDD3S4R434 201 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 SDK1Q7Z5N4 2213 aa13.2□□□□□ -0.3
LMNA-201ENST00000347559 A0A0G2JRQ6 117 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 ANKUB1A6NFN9 424 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 M0R135 149 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 HSPB6O14558 160 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 TRAF3IP2O43734 574 aaPredicted RBP13.19□□□□□ -0.3
LMNA-201ENST00000347559 GYPAP02724 150 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 NMSQ5H8A3 153 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 OR51H1Q8NH63 302 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 MBD3L1Q8WWY6 194 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 ZNF799Q96GE5 643 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 CCL28Q9NRJ3 127 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 TAAR3PQ9P1P4 343 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 MYO9BQ13459 2157 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 RALGAPA1Q6GYQ0 2036 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 NPIPB13A6NJU9 1138 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 NPIPB4C9JG80 1138 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 BMP5P22003 454 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 ARL16Q0P5N6 197 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 OSR2Q8N2R0 312 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 CISD2Q8N5K1 135 aaKnown RBP13.19□□□□□ -0.3
LMNA-201ENST00000347559 MANBALQ9NQG1 85 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 KLRF1Q9NZS2 232 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 IGKV1D-13A0A0B4J2D9 117 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 IGKV1-13P0DP09 117 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 IL3RAP26951 378 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 RAB7AP51149 207 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 MSL2Q9HCI7 577 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 RNF115Q9Y4L5 304 aa13.19□□□□□ -0.3
LMNA-201ENST00000347559 IGKV1-12A0A0C4DH73 117 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 A0A1W2PQF6 199 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 IGKV1D-12P01611 117 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 PSMB3P49720 205 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 C17orf67Q0P5P2 114 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 KCNIP4Q6PIL6 250 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 TCF23Q7RTU1 214 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 CMTM2Q8TAZ6 248 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 RNASE8Q8TDE3 154 aaKnown RBP13.18□□□□□ -0.3
LMNA-201ENST00000347559 RBM24Q9BX46 236 aaKnown RBP13.18□□□□□ -0.3
LMNA-201ENST00000347559 DIDO1Q9BTC0 2240 aaKnown RBP13.18□□□□□ -0.3
LMNA-201ENST00000347559 IL6RP08887 468 aaPredicted RBP13.18□□□□□ -0.3
LMNA-201ENST00000347559 WDR5BQ86VZ2 330 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 OR1K1Q8NGR3 316 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 OR1N1Q8NGS0 311 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 RASL10BQ96S79 203 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 VAMP8Q9BV40 100 aa13.18□□□□□ -0.3
LMNA-201ENST00000347559 EGR1P18146 543 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 CHRNB4P30926 498 aa13.17□□□□□ -0.3
LMNA-201ENST00000347559 TIPARPQ7Z3E1 657 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms