RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 REG4Q9BYZ8 158 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 RPUSD1Q9UJJ7 312 aaKnown RBP15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 FUOMA2VDF0 154 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 C15orf65H3BRN8 121 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 H7C1Q1 480 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 UPK1BO75841 260 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 CCL3L1P16619 93 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 HLA-DMAP28067 261 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 SSTR5P35346 364 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 ERVFRD-1P60508 538 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 HLA-DRB3P79483 266 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 MEF2CQ06413 473 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 KLF9Q13886 244 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 HMGN3Q15651 99 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 C17orf58Q2M2W7 97 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 FAM53AQ6NSI3 398 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 Q6ZS49 121 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 LY6G5BQ8NDX9 201 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 OR1L1Q8NH94 360 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 C8orf46Q8TAG6 207 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 CORO2AQ92828 525 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 TAF9BQ9HBM6 251 aa15.66■□□□□ 0.1
CHMP4A-201ENST00000347519 LOC105371242A0A075B767 164 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 IGKV1-6A0A0C4DH72 117 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 LINC00854A0A1B0GVQ3 168 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 ANKRD20A5PA0PJZ0 165 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 A8MXK9 166 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 TRDCB7Z8K6 153 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 DLX6P56179 175 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 PAX2Q02962 417 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 SRSF7Q16629 238 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 TRIQKQ629K1 86 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 STEAP3Q658P3 488 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 MOB1BQ7L9L4 216 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 RFESDQ8TAC1 157 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 BORCS5Q969J3 196 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 DACT3Q96B18 629 aaPredicted RBP15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 ZNF286AQ9HBT8 521 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 LPAR2Q9HBW0 351 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 OR6C3Q9NZP0 311 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 ITGB1BP2Q9UKP3 347 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 LINC00312Q9Y6C7 94 aa15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 MAP1AP78559 2803 aaPredicted RBP15.65■□□□□ 0.1
CHMP4A-201ENST00000347519 TRGV10A0A0A0MS01 117 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 TRBV23-1A0A0A0MS06 115 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 hADV38S2A0JD32 116 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 M0QYG6 137 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 GPR37O15354 613 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 MMP23AO75900 390 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 PMP2P02689 132 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 CD3DP04234 171 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 ACTBP60709 375 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 ACTG1P63261 375 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 SSBP1Q04837 148 aaKnown RBP15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 LOXL1Q08397 574 aaPredicted RBP15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 HERPUD1Q15011 391 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 IGSF11Q5DX21 431 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 UTF1Q5T230 341 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 FAAP20Q6NZ36 180 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 PRR18Q8N4B5 295 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 TMEM229BQ8NBD8 167 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 OR4D10Q8NGI6 311 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 MMP26Q9NRE1 261 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 CALYQ9NYX4 217 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 ANXA10Q9UJ72 324 aa15.64■□□□□ 0.09
CHMP4A-201ENST00000347519 PPIAL4CA0A0B4J2A2 164 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 POM121CA8CG34 1229 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 PLA2G10O15496 165 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 FABP7O15540 132 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 HBZP02008 142 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 PPIAL4GP0DN37 164 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 OMGP23515 440 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 C6orf183Q5T699 404 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF57Q68EA5 555 aaPredicted RBP15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 CIARTQ8N365 385 aaPredicted RBP15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 ARL11Q969Q4 196 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 KIRREL1Q96J84 757 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 TINAGL1Q9GZM7 467 aaPredicted RBP15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 UBE2J1Q9Y385 318 aaPredicted RBP15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 CCDC168Q8NDH2 2452 aa15.63■□□□□ 0.09
CHMP4A-201ENST00000347519 SDCBPO00560 298 aaPredicted RBP15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 ECDO95905 644 aaPredicted RBP15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 HRH1P35367 487 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 LTC4SQ16873 150 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 TOMM5Q8N4H5 51 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 C11orf42Q8N5U0 333 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF565Q8N9K5 539 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 C1orf159Q96HA4 380 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 KCNIP1Q9NZI2 227 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 LPAR3Q9UBY5 353 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 TBC1D24Q9ULP9 559 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 OTOGQ6ZRI0 2925 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 TEP1Q99973 2627 aaKnown RBP15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 KBTBD11-OT1A0A1B0GTJ5 212 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF729A6NN14 1252 aaPredicted RBP15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 ZNF736B4DX44 427 aaPredicted RBP15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 NPIPB11E5RHQ5 1161 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 FOXH1O75593 365 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 CD74P04233 296 aa15.62■□□□□ 0.09
CHMP4A-201ENST00000347519 CSF1P09603 554 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms