RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 BRD3OSQ6XYD6 125 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 TRAPPC6BQ86SZ2 158 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 OR52I2Q8NH67 350 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 ANGPTL6Q8NI99 470 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 DACT3Q96B18 629 aaPredicted RBP11.37□□□□□ -0.59
TPM4-202ENST00000344824 SPACA1Q9HBV2 294 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 ABCB10Q9NRK6 738 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 RCC2Q9P258 522 aaKnown RBP11.37□□□□□ -0.59
TPM4-202ENST00000344824 SLC25A10Q9UBX3 287 aaPredicted RBP11.37□□□□□ -0.59
TPM4-202ENST00000344824 ZNF222Q9UK12 451 aa11.37□□□□□ -0.59
TPM4-202ENST00000344824 A0A1W2PQ09 198 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 TMEM82A0PJX8 343 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 PSPNO60542 156 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 AMY2BP19961 511 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 CD40LGP29965 261 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 ARF6P62330 175 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 ACTG1P63261 375 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 MRPS15P82914 257 aaKnown RBP11.36□□□□□ -0.59
TPM4-202ENST00000344824 BAK1Q16611 211 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 GPR157Q5UAW9 335 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 HACD4Q5VWC8 232 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 RUSC1-AS1Q66K80 236 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 PDZD9Q8IXQ8 264 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 BCL6BQ8N143 479 aaPredicted RBP11.36□□□□□ -0.59
TPM4-202ENST00000344824 SIGLECL1Q8N7X8 197 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 GDPD1Q8N9F7 314 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 ZNRF1Q8ND25 227 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 OR4S1Q8NGB4 309 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 SETD6Q8TBK2 473 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 C15orf40Q8WUR7 153 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 FCAMRQ8WWV6 532 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 UPRTQ96BW1 309 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 DUX5Q96PT3 197 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 JMJD8Q96S16 334 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 CMSS1Q9BQ75 279 aaKnown RBP11.36□□□□□ -0.59
TPM4-202ENST00000344824 IFT22Q9H7X7 185 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 CHMP1AQ9HD42 196 aaPredicted RBP11.36□□□□□ -0.59
TPM4-202ENST00000344824 ETAA1Q9NY74 926 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 RABL2AQ9UBK7 228 aaPredicted RBP11.36□□□□□ -0.59
TPM4-202ENST00000344824 HSF4Q9ULV5 492 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 RABL2BQ9UNT1 228 aa11.36□□□□□ -0.59
TPM4-202ENST00000344824 LINC00854A0A1B0GVQ3 168 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 SERPINE3A8MV23 424 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 H3BUI4 141 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 GABARAPH6UMI1 98 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 SIGLEC5O15389 551 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 LANCL1O43813 399 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 SSX5O60225 188 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 ECDO95905 644 aaPredicted RBP11.35□□□□□ -0.59
TPM4-202ENST00000344824 PPIAL4GP0DN37 164 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 OR3A1P47881 315 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 HILS1P60008 231 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 RBM39Q14498 530 aaKnown RBP11.35□□□□□ -0.59
TPM4-202ENST00000344824 EDDM3AQ14507 147 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 ARL6IP1Q15041 203 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 GRK1Q15835 563 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 PNLIPRP3Q17RR3 467 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 TRIQKQ629K1 86 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 C16orf87Q6PH81 154 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
TPM4-202ENST00000344824 PLPPR1Q8TBJ4 325 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 SMIM4Q8WVI0 70 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 MAFIPQ8WZ33 124 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 MED30Q96HR3 178 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 IFT46Q9NQC8 304 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 RPUSD1Q9UJJ7 312 aaKnown RBP11.35□□□□□ -0.59
TPM4-202ENST00000344824 DSCAML1Q8TD84 2053 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 A0A0A6YYJ9 748 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 MDFIC2A0A1B0GVS7 189 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 TRIM77I1YAP6 450 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 CTDSPLO15194 276 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 LPLP06858 475 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 LIPFP07098 398 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 INPP1P49441 399 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 MRPS10P82664 201 aaKnown RBP11.35□□□□□ -0.59
TPM4-202ENST00000344824 C17orf107Q6ZR85 190 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 FAM185AQ8N0U4 392 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 GVQW1Q8N7I0 195 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 LHX4Q969G2 390 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 BORCS5Q969J3 196 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 SNX22Q96L94 193 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 THAP7Q9BT49 309 aaPredicted RBP11.35□□□□□ -0.59
TPM4-202ENST00000344824 DNTTIP1Q9H147 329 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM4-202ENST00000344824 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 KLK11Q9UBX7 282 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 ZNF230Q9UIE0 474 aaPredicted RBP11.35□□□□□ -0.59
TPM4-202ENST00000344824 MAB21L2Q9Y586 359 aa11.35□□□□□ -0.59
TPM4-202ENST00000344824 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
TPM4-202ENST00000344824 GSTZ1O43708 216 aaPredicted RBP11.34□□□□□ -0.59
TPM4-202ENST00000344824 TPPPO94811 219 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 MELTFP08582 738 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 IL7P13232 177 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 LMO1P25800 156 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 GDNFP39905 211 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 PRB3Q04118 309 aaPredicted RBP11.34□□□□□ -0.59
TPM4-202ENST00000344824 AESQ08117 197 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 BAMBIQ13145 260 aa11.34□□□□□ -0.59
TPM4-202ENST00000344824 ATPAF1Q5TC12 328 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms