RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 KIR2DS1A0A191URI9 304 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 CRYM-AS1A6NIL9 109 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 ZNF737O75373 536 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 GLP1RP43220 463 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 KIR2DS4P43632 304 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 SELENOVP59797 346 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 KIR2DS1Q14954 304 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 SMIM21Q3B7S5 101 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 LRRC37A5PQ49AS3 106 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 ZNRF1Q8ND25 227 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 LILRB1Q8NHL6 650 aaPredicted RBP11.37□□□□□ -0.59
CDC42-202ENST00000344548 CA5BP1Q8WTZ4 195 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 WIPI2Q9Y4P8 454 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 ZFYVE26Q68DK2 2539 aa11.37□□□□□ -0.59
CDC42-202ENST00000344548 TRBV6-7A0A0A0MS04 114 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 C13orf42A0A1B0GVH6 325 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 TK1P04183 234 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 SFTPCP11686 197 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 GATA4P43694 442 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 MST1LQ2TV78 715 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 ZNF818PQ6ZRF7 136 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 ASCC1Q8N9N2 400 aaKnown RBP11.36□□□□□ -0.59
CDC42-202ENST00000344548 SECTM1Q8WVN6 248 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 RTN4IP1Q8WWV3 396 aaPredicted RBP11.36□□□□□ -0.59
CDC42-202ENST00000344548 OR10C1Q96KK4 312 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 TAF9BQ9HBM6 251 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 CCL28Q9NRJ3 127 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 IL19Q9UHD0 177 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 MAB21L2Q9Y586 359 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 COL12A1Q99715 3063 aa11.36□□□□□ -0.59
CDC42-202ENST00000344548 C17orf100A8MU93 164 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 KCNAB3O43448 404 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 TSC22D2O75157 780 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 OR5AC1P0C628 307 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 MDH2P40926 338 aaKnown RBP11.35□□□□□ -0.59
CDC42-202ENST00000344548 TFF3Q07654 80 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 FIP1L1Q6UN15 594 aaKnown RBP11.35□□□□□ -0.59
CDC42-202ENST00000344548 DEFB108BQ8NET1 73 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 OR1L1Q8NH94 360 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 ESRP2Q9H6T0 727 aaKnown RBP11.35□□□□□ -0.59
CDC42-202ENST00000344548 HEXA-AS1Q9H8Q6 139 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 TEX13DA0A0J9YY54 714 aaPredicted RBP11.35□□□□□ -0.59
CDC42-202ENST00000344548 HOXB5P09067 269 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 GABRA2P47869 451 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 UCP3P55916 312 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 SRSF4Q08170 494 aaKnown RBP11.35□□□□□ -0.59
CDC42-202ENST00000344548 MZT1Q08AG7 82 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 TESK1Q15569 626 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 H1FOOQ8IZA3 346 aaPredicted RBP11.35□□□□□ -0.59
CDC42-202ENST00000344548 FGFRL1Q8N441 504 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 OR4A4PQ8NGN8 299 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 OR13A1Q8NGR1 328 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 OR10Z1Q8NGY1 313 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 LHFPL5Q8TAF8 219 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 MRGPRDQ8TDS7 321 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 PPP1R1CQ8WVI7 109 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 TP53RKQ96S44 253 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 DHRS9Q9BPW9 319 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 CABLES2Q9BTV7 478 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 CLEC4MQ9H2X3 399 aaPredicted RBP11.35□□□□□ -0.59
CDC42-202ENST00000344548 DNAJB11Q9UBS4 358 aa11.35□□□□□ -0.59
CDC42-202ENST00000344548 ERRFI1Q9UJM3 462 aaPredicted RBP11.35□□□□□ -0.59
CDC42-202ENST00000344548 C12orf77C9JDV5 145 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 HSD17B6O14756 317 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 ARPC5O15511 151 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 IFNA2P01563 188 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 CD8AP01732 235 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 GNLYP22749 145 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 HERV-K104P61576 105 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 TLE1Q04724 770 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 FAM90A1Q86YD7 464 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 SGPP2Q8IWX5 399 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 ANGPTL6Q8NI99 470 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 GLYATL2Q8WU03 294 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 PDCD10Q9BUL8 212 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 RDH8Q9NYR8 311 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 ZDHHC8Q9ULC8 765 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 RAI1Q7Z5J4 1906 aaPredicted RBP11.34□□□□□ -0.59
CDC42-202ENST00000344548 FXYD6-FXYD2A0A087WZ82 144 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 C5orf51A6NDU8 294 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 IFNL4K9M1U5 179 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 TNFSF12O43508 249 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 MPC2O95563 127 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 IGLV2-14P01704 120 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 SSTR5P35346 364 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 ECI1P42126 302 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 HCFC1P51610 2035 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 EDDM3AQ14507 147 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 HMGN3Q15651 99 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 ABCA11PQ4W5N1 156 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 OR10J5Q8NHC4 309 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 NAA60Q9H7X0 242 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 PCDHB10Q9UN67 800 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 PPP1R3CQ9UQK1 317 aa11.34□□□□□ -0.59
CDC42-202ENST00000344548 TMEM30CPA0ZSE6 113 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 TMEM8BA6NDV4 472 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 ZG16O60844 167 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 LOXP28300 417 aaPredicted RBP11.33□□□□□ -0.6
CDC42-202ENST00000344548 TMEM187Q14656 261 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms