RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 SLC36A1Q7Z2H8 476 aa12.05□□□□□ -0.48
TRIO-202ENST00000344204 SMIM8Q96KF7 97 aa12.05□□□□□ -0.48
TRIO-202ENST00000344204 HIST1H2BLQ99880 126 aa12.05□□□□□ -0.48
TRIO-202ENST00000344204 TUBD1Q9UJT1 453 aa12.05□□□□□ -0.48
TRIO-202ENST00000344204 SIRT4Q9Y6E7 314 aaPredicted RBP12.05□□□□□ -0.48
TRIO-202ENST00000344204 ZDHHC23Q8IYP9 409 aa12.05□□□□□ -0.48
TRIO-202ENST00000344204 APOBEC3BQ9UH17 382 aaKnown RBP12.05□□□□□ -0.48
TRIO-202ENST00000344204 PTRH2Q9Y3E5 179 aaKnown RBP12.05□□□□□ -0.48
TRIO-202ENST00000344204 TMEM50BP56557 158 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 HKR1P10072 659 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 SMAGPQ0VAQ4 97 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 SPRY1O43609 319 aaPredicted RBP12.04□□□□□ -0.48
TRIO-202ENST00000344204 FUT5Q11128 374 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 RIGQ13278 110 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 Q8WTZ3 238 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 SPSB1Q96BD6 273 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 APOOQ9BUR5 198 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 ZNF256Q9Y2P7 627 aaPredicted RBP12.04□□□□□ -0.48
TRIO-202ENST00000344204 COLCA2A8K830 154 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 ENSAO43768 121 aaKnown RBP12.04□□□□□ -0.48
TRIO-202ENST00000344204 RAMP1O60894 148 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 ZFAND5O76080 213 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 SRSF9Q13242 221 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRIO-202ENST00000344204 TCEAL8Q8IYN2 117 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 OR8G5Q8NG78 346 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 OR2V1Q8NHB1 315 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 MEGF9Q9H1U4 602 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 PRSS1P07477 247 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 MELTFP08582 738 aa12.04□□□□□ -0.48
TRIO-202ENST00000344204 ZNF865P0CJ78 1059 aaPredicted RBP12.03□□□□□ -0.48
TRIO-202ENST00000344204 FKBP2P26885 142 aaKnown RBP12.03□□□□□ -0.48
TRIO-202ENST00000344204 MFAP2P55001 183 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 EDDM3AQ14507 147 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 CNRIP1Q96F85 164 aaPredicted RBP12.03□□□□□ -0.48
TRIO-202ENST00000344204 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 GALR2O43603 387 aaPredicted RBP12.03□□□□□ -0.48
TRIO-202ENST00000344204 FGF17O60258 216 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 HLA-DRB1P01911 266 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 AGAP20933 346 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 OR10G3Q8NGC4 313 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 TMEM38BQ9NVV0 291 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 ADAMTS9Q9P2N4 1935 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 STAG3L3P0CL85 134 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 IL3RAP26951 378 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 TGIF2LYQ8IUE0 185 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 GCM2O75603 506 aaPredicted RBP12.03□□□□□ -0.48
TRIO-202ENST00000344204 OR2J3O76001 311 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 OR4S2Q8NH73 311 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 ZNF718Q3SXZ3 478 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 TBL2Q9Y4P3 447 aaKnown RBP12.03□□□□□ -0.48
TRIO-202ENST00000344204 CNIH1O95406 144 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 ST6GALNAC3Q8NDV1 305 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 HES4Q9HCC6 221 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 RARRES3Q9UL19 164 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 MRPL33O75394 65 aaKnown RBP12.03□□□□□ -0.48
TRIO-202ENST00000344204 IGHEP01854 428 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 OR8B8Q15620 311 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 C16orf52Q8NHV5 167 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 DNAJB12Q9NXW2 375 aaKnown RBP12.03□□□□□ -0.48
TRIO-202ENST00000344204 CCL27Q9Y4X3 112 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 ZNF506Q5JVG8 444 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 C20orf196Q8IYI0 205 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 ANAPC13Q9BS18 74 aa12.03□□□□□ -0.48
TRIO-202ENST00000344204 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.48
TRIO-202ENST00000344204 MMP25Q9NPA2 562 aa12.02□□□□□ -0.48
TRIO-202ENST00000344204 G3V3Y1 287 aa12.02□□□□□ -0.48
TRIO-202ENST00000344204 SYNGR2O43760 224 aa12.02□□□□□ -0.48
TRIO-202ENST00000344204 SHISA6Q6ZSJ9 500 aa12.02□□□□□ -0.48
TRIO-202ENST00000344204 C19orf48Q6RUI8 117 aa12.02□□□□□ -0.48
TRIO-202ENST00000344204 GALMQ96C23 342 aa12.02□□□□□ -0.48
TRIO-202ENST00000344204 TMEM30AQ9NV96 361 aa12.02□□□□□ -0.48
TRIO-202ENST00000344204 POM121L2Q96KW2 1035 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 VCX2Q9H322 139 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 Q6ZSR6 202 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 FAM169BQ8N8A8 192 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 TECRQ9NZ01 308 aaKnown RBP12.02□□□□□ -0.49
TRIO-202ENST00000344204 IGHV2-70P01814 119 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 SLC25A5P05141 298 aaKnown RBP12.02□□□□□ -0.49
TRIO-202ENST00000344204 GCSHP23434 173 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 OR4D11Q8NGI4 311 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 TIMM9Q9Y5J7 89 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 HEPN1Q6WQI6 88 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 NPEPL1Q8NDH3 523 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 TSPAN32Q96QS1 320 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 H3BMH7 237 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 DCAF10Q5QP82 559 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 RTL8AQ9BWD3 113 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 RIF1Q5UIP0 2472 aaKnown RBP12.02□□□□□ -0.49
TRIO-202ENST00000344204 TIMM8AO60220 97 aaPredicted RBP12.02□□□□□ -0.49
TRIO-202ENST00000344204 PDCD6O75340 191 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 CBLN1P23435 193 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 RPS16P62249 146 aaKnown RBP12.02□□□□□ -0.49
TRIO-202ENST00000344204 ACSM6Q6P461 480 aa12.02□□□□□ -0.49
TRIO-202ENST00000344204 NUP210Q8TEM1 1887 aaPredicted RBP12.01□□□□□ -0.49
TRIO-202ENST00000344204 SHBQ15464 509 aa12.01□□□□□ -0.49
TRIO-202ENST00000344204 ZNF77Q15935 545 aa12.01□□□□□ -0.49
TRIO-202ENST00000344204 ZNF542PQ5EBM4 170 aa12.01□□□□□ -0.49
TRIO-202ENST00000344204 SPRYD7Q5W111 196 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms