RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 AKR1E2Q96JD6 320 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 PLK3Q9H4B4 646 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 SPACA1Q9HBV2 294 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 ERRFI1Q9UJM3 462 aaPredicted RBP12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 IGSF23A1L1A6 192 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 CDS2O95674 445 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 UBE2NP61088 152 aaKnown RBP12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 IL24Q13007 206 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 FAM122CQ6P4D5 195 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 PCSK4Q6UW60 755 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 OR10J5Q8NHC4 309 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 TMEM56Q96MV1 263 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 TRIB1Q96RU8 372 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 TMEM56-RWDD3S4R434 201 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 PVALBP20472 110 aaPredicted RBP12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 TMEM217Q8N7C4 229 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 CNEP1R1Q8N9A8 125 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 GINS3Q9BRX5 216 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 CDH20Q9HBT6 801 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 J3QT63 122 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 PGLYRP1O75594 196 aaPredicted RBP12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 CST7O76096 145 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 SPP1P10451 314 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 IGHV1-2P23083 117 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 TNFSF10P50591 281 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 RND3P61587 244 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 PPP1CBP62140 327 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 VAMP2P63027 116 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 HLA-DRB3P79483 266 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 HOXA4Q00056 320 aaPredicted RBP12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 IZUMO4Q1ZYL8 232 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 ARV1Q9H2C2 271 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 ZDHHC11Q9H8X9 412 aa12.66□□□□□ -0.38
VIPAS39-202ENST00000343765 PRSS44E7EML9 344 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 CDIPTO14735 213 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 SMPD2O60906 423 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 GRPP07492 148 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 CTXN2P0C2S0 81 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 DANCRP0C864 163 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 CTRB1P17538 263 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 AKR1C3P42330 323 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 SRSF7Q16629 238 aaKnown RBP eCLIP12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 CTRB2Q6GPI1 263 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 ETV3LQ6ZN32 361 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 SPIN2AQ99865 258 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 SPIN2BQ9BPZ2 258 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 RTL8AQ9BWD3 113 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 LUZP4Q9P127 313 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 PRELID1Q9Y255 219 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 SPAARA0A1B0GVQ0 90 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 TSPAN9O75954 239 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 CD5P06127 495 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 SEC11BP0C7V7 166 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 ZNF14P17017 642 aaPredicted RBP12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 DVL1P1P54792 670 aaPredicted RBP12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 SCCPDHQ8NBX0 429 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 DEFB124Q8NES8 71 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 FDCSPQ8NFU4 85 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 FAM213BQ8TBF2 198 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 EIF5A2Q9GZV4 153 aaKnown RBP12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 GP6Q9HCN6 339 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 C19orf12Q9NSK7 152 aa12.65□□□□□ -0.38
VIPAS39-202ENST00000343765 UCP1P25874 307 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 CEBPDP49716 269 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 LINC00596Q86U02 117 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 CXorf67Q86X51 503 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 PLPPR1Q8TBJ4 325 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 GMPPAQ96IJ6 420 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 PKIBQ9C010 78 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 RIMS4Q9H426 269 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 ESRP2Q9H6T0 727 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 OR2W1Q9Y3N9 320 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 RBM7Q9Y580 266 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF292O60281 2723 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 A0A0G2JRQ6 117 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 H0YL77 283 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 H3BP45 60 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 HSPA12AO43301 675 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 TMEM50AO95807 157 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 OR2H2O95918 312 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 PSG2P11465 335 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 NMSQ5H8A3 153 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF324BQ6AW86 544 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 RNASE11Q8TAA1 199 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 GLRX2Q9NS18 164 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 OR14J1Q9UGF5 321 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 TRAPPC2LQ9UL33 140 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 PPP1R3CQ9UQK1 317 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 H7C2Y5 167 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 WRBO00258 174 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 AGFG2O95081 481 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 NXPH2O95156 264 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 VDAC1P21796 283 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 Q6P435 159 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 OR1J1Q8NGS3 322 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 TMEM171Q8WVE6 324 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 C11orf1Q9H5F2 150 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms