RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CT45A3Q8NHU0 189 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 LURAP1Q96LR2 239 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 NUDT16L1Q9BRJ7 211 aaKnown RBP6.24□□□□□ -1.41
VCAN-202ENST00000342785 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
VCAN-202ENST00000342785 CHD5Q8TDI0 1954 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 MSGN1A6NI15 193 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 C10orf128Q5T292 105 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 TMEM251Q8N6I4 163 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 KLHDC3Q9BQ90 382 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 MTCH1Q9NZJ7 389 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 V9GYS6 101 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 ESPL1Q14674 2120 aa6.24□□□□□ -1.41
VCAN-202ENST00000342785 C3orf80F5H4A9 247 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 ZNF737O75373 536 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 DMWDQ09019 674 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 TMEM18Q96B42 140 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 OR2J1Q9GZK6 312 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 TMEM222Q9H0R3 208 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 ZDHHC11Q9H8X9 412 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 KIAA1456Q9P272 454 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 WDR90Q96KV7 1748 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 SCTP09683 121 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 BSXQ3C1V8 233 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 CXorf66Q5JRM2 361 aaPredicted RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 UBAC2Q8NBM4 344 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 OR4A4PQ8NGN8 299 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 FBXO17Q96EF6 278 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 GPHA2Q96T91 129 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 TMEM147Q9BVK8 224 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 AP4M1O00189 453 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 FGF12P61328 243 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 ERHP84090 104 aaKnown RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 TRIP6Q15654 476 aaKnown RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 CEACAM21Q3KPI0 293 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 CMTM2Q8TAZ6 248 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 TTTY12Q9BZ98 90 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 FREM3P0C091 2139 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 A0A1B0GU03 582 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 G3V3Q6 166 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 H3BQ15 152 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 DEDDO75618 318 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 SP1P08047 785 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 PSG2P11465 335 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 COX6A1P12074 109 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 FABP4P15090 132 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 IGFBP3P17936 291 aaPredicted RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 BMP5P22003 454 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 IGFBP7Q16270 282 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 BTNL8Q6UX41 500 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 OR10X1Q8NGY0 326 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 SLC25A40Q8TBP6 338 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 DTD1Q8TEA8 209 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 MOB3AQ96BX8 217 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 MRPL13Q9BYD1 178 aaKnown RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 CHCHD2Q9Y6H1 151 aaPredicted RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 TMEM265A0A087WTH1 108 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 HSBP1L1C9JCN9 74 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 ZNF708P17019 499 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 CDC34P49427 236 aaPredicted RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 UBE2G1P62253 170 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 PNRC1Q12796 327 aaPredicted RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 ATP6V1FQ16864 119 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 ARSJQ5FYB0 599 aaPredicted RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 NCMAPQ5T1S8 102 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 ZNF705AQ6ZN79 300 aaPredicted RBP6.23□□□□□ -1.41
VCAN-202ENST00000342785 MDP1Q86V88 176 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 DEFB124Q8NES8 71 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 VOPP1Q96AW1 172 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 Q9N2K0 584 aa6.23□□□□□ -1.41
VCAN-202ENST00000342785 LY86O95711 162 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 HAND1O96004 215 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 HKR1P10072 659 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 TNFRSF1AP19438 455 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 CHRNA7P36544 502 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 S100A7AQ86SG5 101 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 NFAM1Q8NET5 270 aaPredicted RBP6.22□□□□□ -1.41
VCAN-202ENST00000342785 FGF11Q92914 225 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 BOD1Q96IK1 185 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 MSL2Q9HCI7 577 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 PATJQ8NI35 1801 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 RNF222A6NCQ9 220 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 CRYM-AS1A6NIL9 109 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 PRR19A6NJB7 356 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 CNIH1O95406 144 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 HRASP01112 189 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 HOXD4P09016 255 aaPredicted RBP6.22□□□□□ -1.41
VCAN-202ENST00000342785 HLA-GP17693 338 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 NEIL1Q96FI4 390 aaPredicted RBP6.22□□□□□ -1.41
VCAN-202ENST00000342785 WNT5BQ9H1J7 359 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 DOPEY2Q9Y3R5 2298 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 DUXBA0A1W2PPF3 345 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 SYNGR1O43759 233 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 GDF9O60383 454 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 SNRNP200O75643 2136 aaKnown RBP6.22□□□□□ -1.41
VCAN-202ENST00000342785 RPS2P15880 293 aaKnown RBP6.22□□□□□ -1.41
VCAN-202ENST00000342785 LDLRAD3Q86YD5 345 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 POC1AQ8NBT0 407 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 ACY3Q96HD9 319 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 SRXN1Q9BYN0 137 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms