RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 C19orf12Q9NSK7 152 aa17.13■□□□□ 0.33
SPG7-202ENST00000341316 MED12LQ86YW9 2145 aa17.13■□□□□ 0.33
SPG7-202ENST00000341316 TRDCB7Z8K6 153 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 PRSS44E7EML9 344 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 M0R036 132 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 TK1P04183 234 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 ZNF14P17017 642 aaPredicted RBP17.12■□□□□ 0.33
SPG7-202ENST00000341316 WT1P19544 449 aaPredicted RBP17.12■□□□□ 0.33
SPG7-202ENST00000341316 CCL11P51671 97 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 UCP2P55851 309 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 ZNF573Q86YE8 665 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 MRPL30Q8TCC3 161 aaKnown RBP17.12■□□□□ 0.33
SPG7-202ENST00000341316 ISOC2Q96AB3 205 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 MED19A0JLT2 244 aaPredicted RBP17.12■□□□□ 0.33
SPG7-202ENST00000341316 OR5B21A6NL26 309 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 DAOP14920 347 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 ZNF44P15621 663 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 CBR1P16152 277 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 IGHV1-2P23083 117 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 ERVS71-1P61550 626 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 S100A12P80511 92 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 NHLH2Q02577 135 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 FBXW12Q6X9E4 464 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 WDR86Q86TI4 376 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 NANOS1Q8WY41 292 aaKnown RBP17.12■□□□□ 0.33
SPG7-202ENST00000341316 GMPPAQ96IJ6 420 aaPredicted RBP17.12■□□□□ 0.33
SPG7-202ENST00000341316 ATP23Q9Y6H3 246 aa17.12■□□□□ 0.33
SPG7-202ENST00000341316 TUSC2O75896 110 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 PRH1P02810 166 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 IL24Q13007 206 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 SPIN3Q5JUX0 258 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 GPR157Q5UAW9 335 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 FAM58AQ8N1B3 248 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 GAPTQ8N292 157 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 HSD17B11Q8NBQ5 300 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 TMEM222Q9H0R3 208 aa17.11■□□□□ 0.33
SPG7-202ENST00000341316 RCL1Q9Y2P8 373 aaKnown RBP17.11■□□□□ 0.33
SPG7-202ENST00000341316 A0A1W2PPH5 198 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 NKX2-6A6NCS4 301 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 C5orf52A6NGY3 159 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 A6NLC8 198 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 MT-ND4LP03901 98 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 HOXB1P14653 301 aaPredicted RBP17.1■□□□□ 0.33
SPG7-202ENST00000341316 P4HA3Q7Z4N8 544 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 OR4D5Q8NGN0 318 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 CLCF1Q9UBD9 225 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 LYZL6O75951 148 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 FTH1P19P0C7X4 201 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 IL13RA2Q14627 380 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 EIF2S3LQ2VIR3 472 aaKnown RBP17.1■□□□□ 0.33
SPG7-202ENST00000341316 RNF212Q495C1 297 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 KRBOX4Q5JUW0 171 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 PCSK4Q6UW60 755 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 RBMS3Q6XE24 437 aaKnown RBP17.1■□□□□ 0.33
SPG7-202ENST00000341316 TMED3Q9Y3Q3 217 aa17.1■□□□□ 0.33
SPG7-202ENST00000341316 A0A1B0GV50 99 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 A0A1W2PPE3 182 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 HSD17B6O14756 317 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 ST8SIA3O43173 380 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 GLAP06280 429 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 S100A6P06703 90 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 IDH3GP51553 393 aaPredicted RBP17.09■□□□□ 0.33
SPG7-202ENST00000341316 TBC1D28Q2M2D7 210 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 ALKBH6Q3KRA9 238 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 NANPQ8TBE9 248 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 OR2J1Q9GZK6 312 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 PLK3Q9H4B4 646 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 ASCL3Q9NQ33 180 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 CCL28Q9NRJ3 127 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 KIR2DS1A0A191URI9 304 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 UMAD1C9J7I0 102 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 SMPD2O60906 423 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 KIR2DS4P43632 304 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 ASCL1P50553 236 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 KIR2DS1Q14954 304 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 FAM185AQ8N0U4 392 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 ZNF565Q8N9K5 539 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 LILRB1Q8NHL6 650 aaPredicted RBP17.09■□□□□ 0.33
SPG7-202ENST00000341316 PKIBQ9C010 78 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 DLL3Q9NYJ7 618 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 FBXO7Q9Y3I1 522 aa17.09■□□□□ 0.33
SPG7-202ENST00000341316 AGAP20933 346 aa17.08■□□□□ 0.33
SPG7-202ENST00000341316 SLC16A13Q7RTY0 426 aa17.08■□□□□ 0.33
SPG7-202ENST00000341316 LINC00596Q86U02 117 aa17.08■□□□□ 0.33
SPG7-202ENST00000341316 ZNF561Q8N587 486 aa17.08■□□□□ 0.33
SPG7-202ENST00000341316 KDF1Q8NAX2 398 aaPredicted RBP17.08■□□□□ 0.33
SPG7-202ENST00000341316 TMEM56Q96MV1 263 aa17.08■□□□□ 0.33
SPG7-202ENST00000341316 UBE2J1Q9Y385 318 aaPredicted RBP17.08■□□□□ 0.33
SPG7-202ENST00000341316 STRAPQ9Y3F4 350 aaKnown RBP17.08■□□□□ 0.33
SPG7-202ENST00000341316 TMEM56-RWDD3S4R434 201 aa17.08■□□□□ 0.33
SPG7-202ENST00000341316 PRR14LQ5THK1 2151 aa17.08■□□□□ 0.32
SPG7-202ENST00000341316 IGHV3-64DA0A0J9YX35 117 aa17.08■□□□□ 0.32
SPG7-202ENST00000341316 UBE2CO00762 179 aa17.08■□□□□ 0.32
SPG7-202ENST00000341316 SLC34A2O95436 690 aa17.08■□□□□ 0.32
SPG7-202ENST00000341316 LMO1P25800 156 aa17.08■□□□□ 0.32
SPG7-202ENST00000341316 CD82P27701 267 aa17.08■□□□□ 0.32
SPG7-202ENST00000341316 RND3P61587 244 aa17.08■□□□□ 0.32
SPG7-202ENST00000341316 Q6P435 159 aa17.08■□□□□ 0.32
SPG7-202ENST00000341316 TMEM182Q6ZP80 229 aaPredicted RBP17.08■□□□□ 0.32
SPG7-202ENST00000341316 SELENOHQ8IZQ5 122 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms