RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 TP53RKQ96S44 253 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 NXT1Q9UKK6 140 aaKnown RBP13.26□□□□□ -0.29
LIMK2-203ENST00000340552 PAM16Q9Y3D7 125 aa13.26□□□□□ -0.29
LIMK2-203ENST00000340552 IGKV1D-43A0A0B4J1Z2 117 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 TSPAN2O60636 221 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 NXPH2O95156 264 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 ANOS1P23352 680 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 DUSP3P51452 185 aaPredicted RBP13.25□□□□□ -0.29
LIMK2-203ENST00000340552 HIST1H3AP68431 136 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 WDFY1Q8IWB7 410 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 IL22RA2Q969J5 263 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 MAGT1Q9H0U3 335 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 PLEKHF2Q9H8W4 249 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 Q9N2K0 584 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 OR6C3Q9NZP0 311 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 NKX6-3A6NJ46 265 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 SSSCA1O60232 199 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 YPEL1O60688 119 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 NDUFB8O95169 186 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 ZNF728P0DKX0 622 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 TMEM225BP0DP42 221 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 HLA-DOBP13765 273 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 FGF8P55075 233 aaPredicted RBP13.25□□□□□ -0.29
LIMK2-203ENST00000340552 FXYD4P59646 89 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 IL24Q13007 206 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 TEX43Q6ZNM6 134 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 NUP54Q7Z3B4 507 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 C6orf201Q7Z4U5 140 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 ANKRD37Q7Z713 158 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 YPEL2Q96QA6 119 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 RTN4RQ9BZR6 473 aa13.25□□□□□ -0.29
LIMK2-203ENST00000340552 TRAV36DV7A0A075B6V5 113 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 TRBV11-1A0A0K0K1C0 115 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 H7BYZ3 331 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 COMMD2Q86X83 199 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 H1FOOQ8IZA3 346 aaPredicted RBP13.24□□□□□ -0.29
LIMK2-203ENST00000340552 ZNF441Q8N8Z8 693 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 OR11L1Q8NGX0 322 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 SLAMF6Q96DU3 332 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 OR5B12Q96R08 314 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 RASL10BQ96S79 203 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 LYRM2Q9NU23 88 aaPredicted RBP13.24□□□□□ -0.29
LIMK2-203ENST00000340552 PRSS50Q9UI38 385 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 NKX2-6A6NCS4 301 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 SERPINE3A8MV23 424 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 ZNF41P51814 821 aaPredicted RBP13.24□□□□□ -0.29
LIMK2-203ENST00000340552 ZNF92Q03936 586 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 ZNF787Q6DD87 383 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 LCN15Q6UWW0 184 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 DPPA3Q6W0C5 159 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 SLC35E1Q96K37 410 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 SLC2A9Q9NRM0 540 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 NAT8Q9UHE5 227 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 ANXA10Q9UJ72 324 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 RNF115Q9Y4L5 304 aa13.24□□□□□ -0.29
LIMK2-203ENST00000340552 BDP1A6H8Y1 2624 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 CEBPZOSA8MTT3 80 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 A8MXE2 369 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 GDF9O60383 454 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 LILRA1O75019 489 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 ARL6IP1Q15041 203 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 TMEM241Q24JQ0 296 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 TPTE2P1Q5T6R2 138 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 CST9LP1Q5W188 147 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 KLHL24Q6TFL4 600 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 MEX3BQ6ZN04 569 aaKnown RBP13.23□□□□□ -0.29
LIMK2-203ENST00000340552 OR1L6Q8NGR2 347 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 RNF150Q9ULK6 438 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 SLC33A1O00400 549 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-203ENST00000340552 NTN3O00634 580 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-203ENST00000340552 PHF1O43189 567 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-203ENST00000340552 HCRTR2O43614 444 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 HRASP01112 189 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 ZNF17P17021 662 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 FAM189A2Q15884 450 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 BSXQ3C1V8 233 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-203ENST00000340552 ZNF845Q96IR2 970 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-203ENST00000340552 TBL1XR1Q9BZK7 514 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 ARHGAP21Q5T5U3 1957 aa13.23□□□□□ -0.29
LIMK2-203ENST00000340552 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 IGKV1-9A0A0C4DH69 117 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 ALG1L2C9J202 215 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 TNFSF12O43508 249 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 TMEM50AO95807 157 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 NKX2-1P43699 371 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-203ENST00000340552 RRADP55042 308 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 TAS2R30P59541 319 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 ZNF154Q13106 437 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 ABHD12BQ7Z5M8 362 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-203ENST00000340552 CALHM1Q8IU99 346 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 STPG4Q8N801 248 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 AGBL5Q8NDL9 886 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 NFAM1Q8NET5 270 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-203ENST00000340552 MAP1LC3B2A6NCE7 125 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 VSTM2BA6NLU5 285 aa13.22□□□□□ -0.29
LIMK2-203ENST00000340552 DXOO77932 396 aaKnown RBP13.22□□□□□ -0.29
LIMK2-203ENST00000340552 MTCP1P56278 107 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms