RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 ZPBPQ9BS86 351 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 ZNF665Q9H7R5 613 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 SNURFLB1AK76 121 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 M0R2Z0 102 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 TBX19O60806 448 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 MT-CO3P00414 261 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 PPYP01298 95 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 TAS2R60P59551 318 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 GNG3P63215 75 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 RTL8BQ17RB0 113 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 KIAA1644Q3SXP7 199 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 FNDC7Q5VTL7 733 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 JMJD6Q6NYC1 403 aaPredicted RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 SPSB1Q96BD6 273 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 NEIL1Q96FI4 390 aaPredicted RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 ATG101Q9BSB4 218 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 CHD9Q3L8U1 2897 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 FAM157CP0CG43 387 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 PPP1CCP36873 323 aaKnown RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 ZNF83P51522 516 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 SPINK14Q6IE38 97 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 OR5A2Q8NGI9 324 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 FER1L6-AS2Q96M78 137 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 OR2J1Q9GZK6 312 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 BET1LQ9NYM9 111 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 TIMM9Q9Y5J7 89 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 RLFQ13129 1914 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 DUXBA0A1W2PPF3 345 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 GSTZ1O43708 216 aaPredicted RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 ACAA2P42765 397 aaKnown RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 HINT1P49773 126 aaPredicted RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 PSG5Q15238 335 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 C6orf15Q6UXA7 325 aaPredicted RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 RNF165Q6ZSG1 346 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 LINC00518Q8N0U6 118 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 OR10D3Q8NH80 312 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 CHRDL1Q9BU40 450 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 CBLN4Q9NTU7 201 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 NAGKQ9UJ70 344 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 HEATR5BQ9P2D3 2071 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 A0A0G2JMZ2 1700 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 TGIF2-C20orf24A0A0A6YYL0 155 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 SLC22A20A6NK97 555 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 IGKV1D-16P01601 117 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 CISD3P0C7P0 127 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 COMPP49747 757 aaPredicted RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 NSUN5P2Q63ZY6 315 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 SGMS2Q8NHU3 365 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 CCL17Q92583 94 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 APOBEC3DQ96AK3 386 aaPredicted RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 SLC25A38Q96DW6 304 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 SOSTQ9BQB4 213 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 SLC17A5Q9NRA2 495 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 CLN8Q9UBY8 286 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 TBX21Q9UL17 535 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 MPDZO75970 2070 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 A0A1W2PPV9 198 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 PIN1P1O15428 100 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 SPINT1O43278 529 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 SOD3P08294 240 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 KIR3DL2P43630 455 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 CXorf66Q5JRM2 361 aaPredicted RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 ZNF600Q6ZNG1 722 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 ATG4DQ86TL0 474 aaPredicted RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 TCTEX1D1Q8N7M0 179 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 OR10G8Q8NGN5 311 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 OR2T6Q8NHC8 308 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 MRPL30Q8TCC3 161 aaKnown RBP7.63□□□□□ -1.19
RTN3-202ENST00000339997 ELSPBP1Q96BH3 223 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 OR10C1Q96KK4 312 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 LRRC3BQ96PB8 259 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 RAB40CQ96S21 281 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 IL36GQ9NZH8 169 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 TAAR3PQ9P1P4 343 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 TINAGQ9UJW2 476 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 PPIL1Q9Y3C6 166 aa7.63□□□□□ -1.19
RTN3-202ENST00000339997 DOCK5Q9H7D0 1870 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 ZNF716A6NP11 495 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 LMO7DNF2Z398 122 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 HOXD4P09016 255 aaPredicted RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 CD1BP29016 333 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 WNT5AP41221 380 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 SURF2Q15527 256 aaPredicted RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 EDARADDQ8WWZ3 215 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 BCL2L2Q92843 193 aaPredicted RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 SPSB2Q99619 263 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 PCED1AQ9H1Q7 454 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 MYOFQ9NZM1 2061 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 DOCK7Q96N67 2140 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 A0A0B4J293 547 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 SHISA7A6NL88 538 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 F5H697 171 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 ST8SIA5O15466 376 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 PLAUP00749 431 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 IL2RAP01589 272 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 HSPB1P04792 205 aaKnown RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 PRSS1P07477 247 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 CTSBP07858 339 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 FAM87AP0C7U9 286 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms