RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SLC25A34Q6PIV7 304 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 MRGPRDQ8TDS7 321 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 SMOC1Q9H4F8 434 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 COX11Q9Y6N1 276 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 ADAP1O75689 374 aa11.4□□□□□ -0.59
USP47-202ENST00000339865 OR8G5Q8NG78 346 aa11.4□□□□□ -0.59
USP47-202ENST00000339865 MUC4Q99102 2169 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 TSPAN2O60636 221 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 ZNF117Q03924 483 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 LGALSLQ3ZCW2 172 aaPredicted RBP11.39□□□□□ -0.59
USP47-202ENST00000339865 MRGPRGQ86SM5 289 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 SPICQ8N5J4 248 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 LSM10Q969L4 123 aaKnown RBP11.39□□□□□ -0.59
USP47-202ENST00000339865 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 METTL12A8MUP2 240 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 CXCL13O43927 109 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 MYOGP15173 224 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 MRPS21P82921 87 aaKnown RBP11.39□□□□□ -0.59
USP47-202ENST00000339865 OR1F12Q8NHA8 337 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 LAT2Q9GZY6 243 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 PLXNB1O43157 2135 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 C2orf83Q53S99 150 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 C15orf39Q6ZRI6 1047 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 OR4S2Q8NH73 311 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 CDCA3Q99618 268 aaPredicted RBP11.39□□□□□ -0.59
USP47-202ENST00000339865 DERL1Q9BUN8 251 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 LINC00470Q9BZP3 86 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 SLC45A1Q9Y2W3 748 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 TAF1P21675 1872 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 OR1K1Q8NGR3 316 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 CEACAM16Q2WEN9 425 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 TCTN3Q6NUS6 607 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 PELI3Q8N2H9 469 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 ST8SIA1Q92185 356 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 PHLDA3Q9Y5J5 127 aa11.39□□□□□ -0.59
USP47-202ENST00000339865 IDSB3KWA1 339 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 FOLR2P14207 255 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 DLX6P56179 175 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 YBX1P67809 324 aaKnown RBP11.38□□□□□ -0.59
USP47-202ENST00000339865 AQP6Q13520 282 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 CLLU1OSQ5K130 101 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 FAM219AQ8IW50 185 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 NOXO1Q8NFA2 376 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 OR4B1Q8NGF8 309 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 OR10D3Q8NH80 312 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 SPSB1Q96BD6 273 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 MTFP1Q9UDX5 166 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 KLF13Q9Y2Y9 288 aaPredicted RBP11.38□□□□□ -0.59
USP47-202ENST00000339865 A0A0B4J293 547 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 ZBTB42B2RXF5 422 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 ANAPC13Q9BS18 74 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 MARVELD1Q9BSK0 173 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 SLIRPQ9GZT3 109 aaKnown RBP11.38□□□□□ -0.59
USP47-202ENST00000339865 LINC01553A4QN01 128 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 HOXC13P31276 330 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 CD300CQ08708 224 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 KRTCAP3Q53RY4 240 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 NIT1Q86X76 327 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 TRAV21A0A0B4J279 112 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 SS18L1O75177 396 aaPredicted RBP11.38□□□□□ -0.59
USP47-202ENST00000339865 CTAG2O75638 210 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 CXCL3P19876 107 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 TMEM249Q2WGJ8 235 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 PLPPR5Q32ZL2 321 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 JMJD6Q6NYC1 403 aaPredicted RBP11.38□□□□□ -0.59
USP47-202ENST00000339865 TMEM202A6NGA9 273 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 SELENOPP49908 381 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 CTF1Q16619 201 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 CLPPQ16740 277 aaPredicted RBP11.38□□□□□ -0.59
USP47-202ENST00000339865 FGF20Q9NP95 211 aaPredicted RBP11.38□□□□□ -0.59
USP47-202ENST00000339865 PEF1Q9UBV8 284 aaKnown RBP11.38□□□□□ -0.59
USP47-202ENST00000339865 TRAV8-2A0A0B4J237 113 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 K7ESM1 405 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 HOXA6P31267 233 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 C16orf52Q8NHV5 167 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 B9D1Q9UPM9 204 aa11.38□□□□□ -0.59
USP47-202ENST00000339865 IGHV3-21A0A0B4J1V1 117 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 CTAG1AP78358 180 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 DAPP1Q9UN19 280 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 ZNF250P15622 560 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 MPLP40238 635 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 METRNLQ641Q3 311 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 PDXPQ96GD0 296 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 DOK1Q99704 481 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 TMEM160Q9NX00 188 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 CDC42EP3Q9UKI2 254 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 HDGFL3Q9Y3E1 203 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 M0QZQ0 153 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 TM4SF1P30408 202 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 SOSTQ9BQB4 213 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 ZNF665Q9H7R5 613 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 IL19Q9UHD0 177 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 A8MWL6 223 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 CEACAM3P40198 252 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 ADAMTSL4Q6UY14 1074 aa11.37□□□□□ -0.59
USP47-202ENST00000339865 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms