RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SUMF2Q8NBJ7 301 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 OR5P3Q8WZ94 311 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 AIFM2Q9BRQ8 373 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 POMT1Q9Y6A1 747 aa13.9□□□□□ -0.18
LITAF-201ENST00000339430 A0A1B0GV50 99 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 ANKRD30BLA7E2S9 258 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 TSPAN15O95858 294 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 IGHG3P01860 377 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 CD5P06127 495 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 OMGP23515 440 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 KCNJ3P48549 501 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 MPV17LQ2QL34 196 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 GPR157Q5UAW9 335 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 DHRS7BQ6IAN0 325 aaPredicted RBP13.89□□□□□ -0.19
LITAF-201ENST00000339430 SELENOHQ8IZQ5 122 aaKnown RBP13.89□□□□□ -0.19
LITAF-201ENST00000339430 WDYHV1Q96HA8 205 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 KIRREL1Q96J84 757 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 AKR1E2Q96JD6 320 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 ARV1Q9H2C2 271 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 TP53TG5Q9Y2B4 290 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 RFNGQ9Y644 331 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 A0A1W2PR80 420 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 ADAM20O43506 726 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 RHBDL1O75783 438 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 PRH1P02810 166 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 PLA2G5P39877 138 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 CAMLGP49069 296 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 PPT1P50897 306 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 UCNP55089 124 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 EWSR1Q01844 656 aaKnown RBP eCLIP13.89□□□□□ -0.19
LITAF-201ENST00000339430 CLINT1Q14677 625 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 HFEQ30201 348 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 MDP1Q86V88 176 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 GINS3Q9BRX5 216 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 ZFP57Q9NU63 452 aa13.89□□□□□ -0.19
LITAF-201ENST00000339430 H7C2Y5 167 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 SSSCA1O60232 199 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
LITAF-201ENST00000339430 DVL1P1P54792 670 aaPredicted RBP13.88□□□□□ -0.19
LITAF-201ENST00000339430 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
LITAF-201ENST00000339430 Q6ZS49 121 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 FAM185AQ8N0U4 392 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 BOD1Q96IK1 185 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 RNF122Q9H9V4 155 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 ATP23Q9Y6H3 246 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 IGHV3-64DA0A0J9YX35 117 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 SEC11BP0C7V7 166 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 DANCRP0C864 163 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 SPP1P10451 314 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 ETV3LQ6ZN32 361 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 OR1K1Q8NGR3 316 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 LILRB1Q8NHL6 650 aaPredicted RBP13.88□□□□□ -0.19
LITAF-201ENST00000339430 MRPL30Q8TCC3 161 aaKnown RBP13.88□□□□□ -0.19
LITAF-201ENST00000339430 ZNF71Q9NQZ8 489 aaPredicted RBP13.88□□□□□ -0.19
LITAF-201ENST00000339430 NDRG3Q9UGV2 375 aa13.88□□□□□ -0.19
LITAF-201ENST00000339430 TRAV39A0A0B4J263 110 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 IGSF23A1L1A6 192 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 FAM157AC9JC47 383 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 TMEM182Q6ZP80 229 aaPredicted RBP13.87□□□□□ -0.19
LITAF-201ENST00000339430 MYPOPQ86VE0 399 aaPredicted RBP13.87□□□□□ -0.19
LITAF-201ENST00000339430 OR2C3Q8N628 320 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 POM121Q96HA1 1249 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 SAV1Q9H4B6 383 aaPredicted RBP13.87□□□□□ -0.19
LITAF-201ENST00000339430 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 TRAV24A0A0B4J272 114 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 KIR2DS1A0A191URI9 304 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 CDS2O95674 445 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 AKR1C3P42330 323 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 KIR2DS4P43632 304 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 SRPXP78539 464 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 KIR2DS1Q14954 304 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 FAM58AQ8N1B3 248 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 LYPD6BQ8NI32 183 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 MLXQ9UH92 298 aa13.87□□□□□ -0.19
LITAF-201ENST00000339430 MAP1BP46821 2468 aaKnown RBP13.86□□□□□ -0.19
LITAF-201ENST00000339430 CELA3BP08861 270 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 H2AFB1P0C5Y9 115 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 FAM87AP0C7U9 286 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 ZNF44P15621 663 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 SNCAP37840 140 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 GNG3P63215 75 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 ZNF573Q86YE8 665 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 IL1F10Q8WWZ1 152 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 C19orf12Q9NSK7 152 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 CACFD1Q9UGQ2 172 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 TUSC2O75896 110 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 SRSF7Q16629 238 aaKnown RBP eCLIP13.86□□□□□ -0.19
LITAF-201ENST00000339430 FBXW9Q5XUX1 488 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 PRR18Q8N4B5 295 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 OR10Z1Q8NGY1 313 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 UBALD1Q8TB05 177 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 BCL2L2Q92843 193 aaPredicted RBP13.86□□□□□ -0.19
LITAF-201ENST00000339430 EIF5A2Q9GZV4 153 aaKnown RBP13.86□□□□□ -0.19
LITAF-201ENST00000339430 MPC1Q9Y5U8 109 aa13.86□□□□□ -0.19
LITAF-201ENST00000339430 DSPP15924 2871 aaKnown RBP13.85□□□□□ -0.19
LITAF-201ENST00000339430 RND3P61587 244 aa13.85□□□□□ -0.19
LITAF-201ENST00000339430 FLI1Q01543 452 aaPredicted RBP13.85□□□□□ -0.19
LITAF-201ENST00000339430 GUK1Q16774 197 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms