RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 C3orf80F5H4A9 247 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 RNASEK-C17orf49H0YIS7 233 aa5.44□□□□□ -1.54
PRKDC-202ENST00000338368 TRGV10A0A0A0MS01 117 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 P2RY6Q15077 328 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 MSL2Q9HCI7 577 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 DLL3Q9NYJ7 618 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM210A6NLX4 147 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 SNCGO76070 127 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 OR10C1Q96KK4 312 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 MYOZ1Q9NP98 299 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 RNF7Q9UBF6 113 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF716A6NP11 495 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 CTSSP25774 331 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 EWSR1Q01844 656 aaKnown RBP eCLIP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF345Q14585 488 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 UQCC3Q6UW78 93 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 CLEC9AQ6UXN8 241 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 FRZBQ92765 325 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 SLC25A28Q96A46 364 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 UHRF2Q96PU4 802 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 V9GYS6 101 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 hCG_38984A0A1B0GV85 526 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 C19orf67A6NJJ6 358 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 HAND1O96004 215 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 F2RP25116 425 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 MIDNQ504T8 468 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 RAB40CQ96S21 281 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 CACNG5Q9UF02 275 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 TAGLN2P37802 199 aaKnown RBP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 SAT2Q96F10 170 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 IGKV1-9A0A0C4DH69 117 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 NEURL1O76050 574 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 CBR1P16152 277 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 PSMB3P49720 205 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 HLA-DRB3P79483 266 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 GUK1Q16774 197 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 OPN3Q9H1Y3 402 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 C19orf12Q9NSK7 152 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 AHRRA9YTQ3 701 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 SYNGR3O43761 229 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 NKX6-1P78426 367 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 HAGHQ16775 308 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 RND1Q92730 232 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 GALR2O43603 387 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 ADH4P08319 380 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 SCTP09683 121 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 METTL15P1P0C7V9 234 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 COX5AP20674 150 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 P2RY4P51582 365 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 LYG1Q8N1E2 194 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 OR5D13Q8NGL4 314 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 POM121Q96HA1 1249 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 UQCC1Q9NVA1 299 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 HOXB1P14653 301 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-202ENST00000338368 C1QTNF12Q5T7M4 302 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 RXFP4Q8TDU9 374 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 GNG13Q9P2W3 67 aa5.43□□□□□ -1.54
PRKDC-202ENST00000338368 A0A0U1RQK1 487 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 LRRC3CA6NJW4 275 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 A8MXE2 369 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 RCC1P18754 421 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ADIRFQ15847 76 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 Q3ZCU0 254 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 CALHM1Q8IU99 346 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 COMMD5Q9GZQ3 224 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 SERTAD4Q9NUC0 356 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 IGFBP7Q16270 282 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF660Q6AZW8 331 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-202ENST00000338368 TPRX1Q8N7U7 411 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 BVESQ8NE79 360 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF524Q96C55 264 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 OR5AC2Q9NZP5 309 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 FBLN5Q9UBX5 448 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ABCD4O14678 606 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 GABRA6Q16445 453 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 NRN1LQ496H8 165 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 CCL17Q92583 94 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 FAM96BQ9Y3D0 163 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 NAT2P11245 290 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 RPS16P62249 146 aaKnown RBP5.42□□□□□ -1.54
PRKDC-202ENST00000338368 LINC00052Q96N35 136 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 Q6ZT83 130 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF552Q9H707 407 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-202ENST00000338368 GP6Q9HCN6 339 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 Q9N2K0 584 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 MMP26Q9NRE1 261 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 SHOXO15266 292 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 SEC11BP0C7V7 166 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 AESQ08117 197 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 AVPI1Q5T686 147 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 C1orf185Q5T7R7 199 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ABLIM2Q6H8Q1 611 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ASPHD2Q6ICH7 369 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 WNT2BQ93097 391 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 PKIBQ9C010 78 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF727A8MUV8 499 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ZP3P21754 424 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 EP400Q96L91 3159 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 PINLYPA6NC86 204 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms