RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 ZNF230Q9UIE0 474 aaPredicted RBP10.28□□□□□ -0.76
PRIM1-201ENST00000338193 KCNS2Q9ULS6 477 aa10.28□□□□□ -0.76
PRIM1-201ENST00000338193 LINC00312Q9Y6C7 94 aa10.28□□□□□ -0.76
PRIM1-201ENST00000338193 TEP1Q99973 2627 aaKnown RBP10.28□□□□□ -0.76
PRIM1-201ENST00000338193 A0A1W2PRD5 423 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 A0A1W2PRF3 423 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 A0A1W2PRM7 423 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 C17orf98A8MV24 154 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 A8MV72 311 aaPredicted RBP10.27□□□□□ -0.76
PRIM1-201ENST00000338193 C12orf77C9JDV5 145 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 RNASEK-C17orf49H0YIS7 233 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 C15orf65H3BRN8 121 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 FSHBP01225 129 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 HLA-DQB1P01920 261 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 FCER2P06734 321 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 ZNF728P0DKX0 622 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 SOX6P35712 828 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 TAS2R20P59543 309 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 MEF2CQ06413 473 aaPredicted RBP10.27□□□□□ -0.76
PRIM1-201ENST00000338193 LTC4SQ16873 150 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 FAM120AOSQ5T036 256 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 RUSC1-AS1Q66K80 236 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 ZNF880Q6PDB4 577 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 TRAPPC6BQ86SZ2 158 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 OR1L1Q8NH94 360 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 MCFD2Q8NI22 146 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 ACOT12Q8WYK0 555 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 CORO2AQ92828 525 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 POM121Q96HA1 1249 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 ZNF714Q96N38 554 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 AUP1Q9Y679 476 aa10.27□□□□□ -0.76
PRIM1-201ENST00000338193 MXRA5Q9NR99 2828 aa10.27□□□□□ -0.77
PRIM1-201ENST00000338193 hADV38S2A0JD32 116 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 MEIOCA2RUB1 952 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 METTL21EPA6NDL7 271 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 MEIS3P1A6NDR6 274 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 TMEM127O75204 238 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 TOX4O94842 621 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 IGHV3-7P01780 117 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 APOA1P02647 267 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 GLAP06280 429 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 HOXB4P17483 251 aaPredicted RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 KCNJ3P48549 501 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 DYNC1I2Q13409 638 aaKnown RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 RBM39Q14498 530 aaKnown RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 CNPY1Q3B7I2 92 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 BTNL3Q6UXE8 466 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 LEAP2Q969E1 77 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 LHX4Q969G2 390 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 CMSS1Q9BQ75 279 aaKnown RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 C6orf62Q9GZU0 229 aaPredicted RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 AUNIPQ9H7T9 357 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 MBNL3Q9NUK0 354 aaKnown RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 CALYQ9NYX4 217 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 NDUFA13Q9P0J0 144 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 SONP18583 2426 aaKnown RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 TRGV10A0A0A0MS01 117 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 IGHV3-43A0A0B4J1X8 118 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 TRAV40A0A0B4J280 105 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 FAM25AB3EWG3 89 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 FAM25CB3EWG5 89 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 FAM25GB3EWG6 89 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 RGS5O15539 181 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 XRCC3O43542 346 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 IGHV3-43DP0DP04 118 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 COX7A1P24310 79 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 PAX6P26367 422 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 GNMTQ14749 295 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 C11orf91Q3C1V1 193 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 RNASE12Q5GAN4 147 aaKnown RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 LDLRAD2Q5SZI1 272 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 HACD4Q5VWC8 232 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 CNIH2Q6PI25 160 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 BCL6BQ8N143 479 aaPredicted RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 KIR3DL3Q8N743 410 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 GVQW1Q8N7I0 195 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 SETD6Q8TBK2 473 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 AP3S1Q92572 193 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 UPRTQ96BW1 309 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 CHMP1AQ9HD42 196 aaPredicted RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 EXTL2Q9UBQ6 330 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 TRAPPC2LQ9UL33 140 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 UBE2J1Q9Y385 318 aaPredicted RBP10.26□□□□□ -0.77
PRIM1-201ENST00000338193 KPTNQ9Y664 436 aa10.26□□□□□ -0.77
PRIM1-201ENST00000338193 FN1P02751 2386 aaKnown RBP10.25□□□□□ -0.77
PRIM1-201ENST00000338193 NSD1Q96L73 2696 aaPredicted RBP10.25□□□□□ -0.77
PRIM1-201ENST00000338193 IGKV1-6A0A0C4DH72 117 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 CENPVL3A0A0U1RRI6 287 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 KBTBD11-OT1A0A1B0GTJ5 212 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 NPIPB11E5RHQ5 1161 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 J3QLI3 93 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 M0R1W7 72 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 CLPXO76031 633 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 FCGR3AP08637 254 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 SCTP09683 121 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 CD3GP09693 182 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 IGHV1-8P0DP01 117 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 TNFSF8P32971 234 aa10.25□□□□□ -0.77
PRIM1-201ENST00000338193 ARFRP1Q13795 201 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms