RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 OOEPA6NGQ2 149 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 MUC1P15941 1255 aaPredicted RBP12.01□□□□□ -0.49
RTN4-202ENST00000337526 H2BFSP57053 126 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 SMRP1Q8NCR6 262 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 CTHRC1Q96CG8 243 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 MSL2Q9HCI7 577 aa12.01□□□□□ -0.49
RTN4-202ENST00000337526 SCN2AQ99250 2005 aa12□□□□□ -0.49
RTN4-202ENST00000337526 TRBV5-7A0A0A0MS05 114 aa12□□□□□ -0.49
RTN4-202ENST00000337526 SHISA3A0PJX4 238 aa12□□□□□ -0.49
RTN4-202ENST00000337526 HAND1O96004 215 aa12□□□□□ -0.49
RTN4-202ENST00000337526 FCGR3AP08637 254 aa12□□□□□ -0.49
RTN4-202ENST00000337526 SMIM10L1P0DMW3 83 aa12□□□□□ -0.49
RTN4-202ENST00000337526 CRISP2P16562 243 aa12□□□□□ -0.49
RTN4-202ENST00000337526 CAMPP49913 170 aa12□□□□□ -0.49
RTN4-202ENST00000337526 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
RTN4-202ENST00000337526 SMIM10Q96HG1 83 aa12□□□□□ -0.49
RTN4-202ENST00000337526 ADTRPQ96IZ2 230 aa12□□□□□ -0.49
RTN4-202ENST00000337526 GAL3ST2Q9H3Q3 398 aa12□□□□□ -0.49
RTN4-202ENST00000337526 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
RTN4-202ENST00000337526 SIRT7Q9NRC8 400 aa12□□□□□ -0.49
RTN4-202ENST00000337526 SIGLEC5O15389 551 aa12□□□□□ -0.49
RTN4-202ENST00000337526 KIR2DS2P43631 304 aa12□□□□□ -0.49
RTN4-202ENST00000337526 SULT1A2P50226 295 aa12□□□□□ -0.49
RTN4-202ENST00000337526 GNB2P62879 340 aa12□□□□□ -0.49
RTN4-202ENST00000337526 SIGLEC14Q08ET2 396 aa12□□□□□ -0.49
RTN4-202ENST00000337526 TMEM183BQ1AE95 376 aa12□□□□□ -0.49
RTN4-202ENST00000337526 C1orf210Q8IVY1 113 aa12□□□□□ -0.49
RTN4-202ENST00000337526 OR1L4Q8NGR5 311 aa12□□□□□ -0.49
RTN4-202ENST00000337526 HSD17B10Q99714 261 aaKnown RBP12□□□□□ -0.49
RTN4-202ENST00000337526 TDRD6O60522 2096 aaKnown RBP12□□□□□ -0.49
RTN4-202ENST00000337526 A0A1W2PN81 502 aa12□□□□□ -0.49
RTN4-202ENST00000337526 ETFRF1Q6IPR1 90 aa12□□□□□ -0.49
RTN4-202ENST00000337526 TMEM108Q6UXF1 575 aa12□□□□□ -0.49
RTN4-202ENST00000337526 C11orf42Q8N5U0 333 aa12□□□□□ -0.49
RTN4-202ENST00000337526 OR4A4PQ8NGN8 299 aa12□□□□□ -0.49
RTN4-202ENST00000337526 RPEQ96AT9 228 aa12□□□□□ -0.49
RTN4-202ENST00000337526 KCNK17Q96T54 332 aa12□□□□□ -0.49
RTN4-202ENST00000337526 WDR61Q9GZS3 305 aaKnown RBP12□□□□□ -0.49
RTN4-202ENST00000337526 WDR54Q9H977 334 aa12□□□□□ -0.49
RTN4-202ENST00000337526 GAPDHP04406 335 aaKnown RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 ISG15P05161 165 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 LINC01590Q5TEZ4 76 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 FAM181AQ8N9Y4 354 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 SSMEM1Q8WWF3 244 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 EP300Q09472 2414 aaPredicted RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 PAGE4O60829 102 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 IL9P15248 144 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 PTTG1IPP53801 180 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 RBM11P57052 281 aaKnown RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 SOX8P57073 446 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 TCTEX1D1Q8N7M0 179 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 BLNKQ8WV28 456 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 PACRGQ96M98 296 aaPredicted RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 LYRM2Q9NU23 88 aaPredicted RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 A0A087X0M5 115 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 TRAV34A0A0B4J273 112 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 A0A1B0GX30 115 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 LMX1BO60663 402 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 PSG2P11465 335 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 SPCS3P61009 180 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 UBE2L3P68036 154 aaKnown RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 ANAPC16Q96DE5 110 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 TDRD15B5MCY1 1934 aaKnown RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 SPTBN1Q01082 2364 aaKnown RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 OR5H1A6NKK0 313 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 ZNF253O75346 499 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 ACTL6AO96019 429 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 IFI6P09912 130 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 KHDC3LQ587J8 217 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 MAFAQ8NHW3 353 aaPredicted RBP11.99□□□□□ -0.49
RTN4-202ENST00000337526 TMEM167BQ9NRX6 74 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 CASP8AP2Q9UKL3 1982 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 ESPL1Q14674 2120 aa11.99□□□□□ -0.49
RTN4-202ENST00000337526 NCBP2LA6PVI3 153 aaKnown RBP11.98□□□□□ -0.49
RTN4-202ENST00000337526 C1QL1O75973 258 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 ORM2P19652 201 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 RUNX1Q01196 453 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 RPEL1Q2QD12 228 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 TMEM252Q8N6L7 170 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 OR1K1Q8NGR3 316 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 ZNF519Q8TB69 540 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 ADAMTS17Q8TE56 1095 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 COL11A1P12107 1806 aaPredicted RBP11.98□□□□□ -0.49
RTN4-202ENST00000337526 FHL5Q5TD97 284 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 OR4F17Q8NGA8 305 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 MRPL30Q8TCC3 161 aaKnown RBP11.98□□□□□ -0.49
RTN4-202ENST00000337526 SMDT1Q9H4I9 107 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 SEBOXQ9HB31 216 aaPredicted RBP11.98□□□□□ -0.49
RTN4-202ENST00000337526 GLRX2Q9NS18 164 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 CCKARP32238 428 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 P2RY4P51582 365 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 FAM74A7A6NL05 159 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 G6PCP35575 357 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 PSG4Q00888 419 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 SPEM2Q0P670 501 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 FAM74A3Q4VXF1 159 aa11.98□□□□□ -0.49
RTN4-202ENST00000337526 OR4P4Q8NGL7 312 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms