RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 NEU3Q9UQ49 428 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 OR2W1Q9Y3N9 320 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 IGHV3-43A0A0B4J1X8 118 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 LINC01565O15544 149 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 IGHV3-43DP0DP04 118 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 FAM3BP58499 235 aaPredicted RBP11.5□□□□□ -0.57
HLCS-201ENST00000336648 HYAL1Q12794 435 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 TMEM183AQ8IXX5 376 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 OR1L8Q8NGR8 309 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 LHFPL5Q8TAF8 219 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 Q6ZS52 159 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 MRAP2Q96G30 205 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 LHX9Q9NQ69 397 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 URB1O60287 2271 aaKnown RBP11.5□□□□□ -0.57
HLCS-201ENST00000336648 IGHV1OR15-9A0A0B4J2B8 117 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 ZNF273Q14593 569 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 ZNF880Q6PDB4 577 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 FLYWCH2Q96CP2 140 aaKnown RBP11.5□□□□□ -0.57
HLCS-201ENST00000336648 ALX4Q9H161 411 aaPredicted RBP11.5□□□□□ -0.57
HLCS-201ENST00000336648 ZNF385CQ66K41 422 aaPredicted RBP11.5□□□□□ -0.57
HLCS-201ENST00000336648 PLPPR2Q96GM1 343 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 HIST1H4GQ99525 98 aa11.5□□□□□ -0.57
HLCS-201ENST00000336648 RBM38Q9H0Z9 239 aaKnown RBP11.5□□□□□ -0.57
HLCS-201ENST00000336648 MICAL3Q7RTP6 2002 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 LOXHD1Q8IVV2 1947 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 HBZP02008 142 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 OR2V2Q96R30 315 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 H3BQ15 152 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 DAOP14920 347 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 OR4P4Q8NGL7 312 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 ABHD3Q8WU67 409 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 ALG14Q96F25 216 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 VSTM2LQ96N03 204 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 FAM90A27PA6NNH2 459 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 MESTQ5EB52 335 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 TEPPQ6URK8 271 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 SNRNP40Q96DI7 357 aaKnown RBP11.49□□□□□ -0.57
HLCS-201ENST00000336648 RPL36A-HNRNPH2H7BZ11 118 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 IGFBP6P24592 240 aaPredicted RBP11.49□□□□□ -0.57
HLCS-201ENST00000336648 HOXA6P31267 233 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 PLPPR5Q32ZL2 321 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 DMRTC1Q5HYR2 192 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 SEZ6L2Q6UXD5 910 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 MUC15Q8N387 334 aa11.49□□□□□ -0.57
HLCS-201ENST00000336648 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
HLCS-201ENST00000336648 ZNF683Q8IZ20 524 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 RNF133Q8WVZ7 376 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 GMPPAQ96IJ6 420 aaPredicted RBP11.48□□□□□ -0.57
HLCS-201ENST00000336648 OR2H1Q9GZK4 316 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 OPN4Q9UHM6 478 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 TCFL5Q9UL49 500 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 PKD1L3Q7Z443 1732 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 LINC00862A6NCI5 91 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 C3orf80F5H4A9 247 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 CDC42EP2O14613 210 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 CDX4O14627 284 aaPredicted RBP11.48□□□□□ -0.57
HLCS-201ENST00000336648 GAPTQ8N292 157 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 ZG16BQ96DA0 208 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 CHRNA10Q9GZZ6 450 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 GVQW1Q8N7I0 195 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 ST6GAL2Q96JF0 529 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 PMCHL2Q9BQD1 86 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 ADAP1O75689 374 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 C19orf57Q0VDD7 668 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 TEX29Q8N6K0 151 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 BEND2Q8NDZ0 799 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 RND1Q92730 232 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 RASL10BQ96S79 203 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 CHST5Q9GZS9 411 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 SAP30LQ9HAJ7 183 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 HSF4Q9ULV5 492 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 OR4C45A6NMZ5 311 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 PPP1CCP36873 323 aaKnown RBP11.48□□□□□ -0.57
HLCS-201ENST00000336648 KIR3DL2P43630 455 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 MMP16P51512 607 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 SERF2P84101 59 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 NAAAQ02083 359 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 OR8I2Q8N0Y5 310 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 FRRS1LQ9P0K9 344 aa11.48□□□□□ -0.57
HLCS-201ENST00000336648 NRAPQ86VF7 1730 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 TOGARAM1Q9Y4F4 1720 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 PITX3O75364 302 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 MT-ND6P03923 174 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 PRSS8Q16651 343 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 CT55Q8WUE5 264 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 ABHD14AQ9BUJ0 271 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 RNF122Q9H9V4 155 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 FAM157CP0CG43 387 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 SPINK9Q5DT21 86 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 C16orf82Q7Z2V1 217 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 AMER3Q8N944 861 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 WFIKKN1Q96NZ8 548 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 CDX2Q99626 313 aaPredicted RBP11.47□□□□□ -0.57
HLCS-201ENST00000336648 WDR54Q9H977 334 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 FZR1Q9UM11 496 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 V9GYH0 126 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 SYNGR1O43759 233 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 SELENOPP49908 381 aa11.47□□□□□ -0.57
HLCS-201ENST00000336648 LRRC75AQ8NAA5 344 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms