RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 LINC00052Q96N35 136 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 GNRHR2Q96P88 292 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MBOAT4Q96T53 435 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF665Q9H7R5 613 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 TCRBV5S4A2TA0A5A2 114 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MKRN2OSH3BPM6 223 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 TSPAN2O60636 221 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 HOXA5P20719 270 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 PGLYRP3Q96LB9 341 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 DUX3Q96PT4 197 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MYADMQ96S97 322 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CHST6Q9GZX3 395 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MTFP1Q9UDX5 166 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 FAM186AA6NE01 2351 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 LOC105371242A0A075B767 164 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SMIM35A0A1B0GVV1 85 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CYB561D2O14569 222 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 TNFSF13O75888 250 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 GP1BBP13224 206 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 PLNP26678 52 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 KIR2DL3P43628 341 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 EVX1P49640 407 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 VEGFBP49765 207 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 NUBP1P53384 320 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 FXYD4P59646 89 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 PITX1P78337 314 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ABHD17BQ5VST6 288 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF774Q6NX45 483 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SLC25A42Q86VD7 318 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MS4A8Q9BY19 250 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MMACHCQ9Y4U1 282 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CREBBPQ92793 2442 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM213A2RRL7 107 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SRFP11831 508 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 HLA-GP17693 338 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 OR2T6Q8NHC8 308 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 STRADBQ9C0K7 418 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SMPXQ9UHP9 88 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 A0A1W2PQF6 199 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 H3BMM0 161 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 GLIPR1P48060 266 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 RPL30P62888 115 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 PSAPL1Q6NUJ1 521 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 AGBL5Q8NDL9 886 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 TET1Q8NFU7 2136 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 FGF13Q92913 245 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 ABHD14BQ96IU4 210 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 GPR84Q9NQS5 396 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 PLEKHB1Q9UF11 243 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 CEP192Q8TEP8 1941 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 LRRC37A3O60309 1634 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 AHRRA9YTQ3 701 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 AMY1AP04745 511 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 FAM89BQ8N5H3 189 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 TTC9BQ8N6N2 239 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 NRXN3Q9Y4C0 1643 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 A0A0G2JLM5 398 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 BUB3O43684 328 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SAXO2Q658L1 398 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 ARHGEF39Q8N4T4 335 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SGMS2Q8NHU3 365 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 MBNL3Q9NUK0 354 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 TRPM3Q9HCF6 1732 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 KIR2DS2P43631 304 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 DRAM1Q8N682 238 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF319Q9P2F9 582 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF337Q9Y3M9 751 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 PIK3C2AO00443 1686 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 H3BQ15 152 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 FCMRO60667 390 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 GPANK1O95872 356 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 CD3DP04234 171 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SCCPDHQ8NBX0 429 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 PHOSPHO1Q8TCT1 267 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SMIM4Q8WVI0 70 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 TM4SF19Q96DZ7 209 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 DOCK5Q9H7D0 1870 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 VSIG10L2P0DP72 767 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 EMP3P54852 163 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SKP2Q13309 424 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SIX1Q15475 284 aaPredicted RBP5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 TPGS2Q68CL5 300 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 OR8A1Q8NGG7 326 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 ST6GAL2Q96JF0 529 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SMOC1Q9H4F8 434 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 RAXQ9Y2V3 346 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 R4GN57 208 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SNURFLB1AK76 121 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 UPK2O00526 184 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 SEMG1P04279 462 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 CD5P06127 495 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 MRPL3P09001 348 aaKnown RBP5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 CD46P15529 392 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 ADORA2BP29275 332 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 TECRLQ5HYJ1 363 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 C10orf128Q5T292 105 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 OR52E1Q8NGJ3 308 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 GHSRQ92847 366 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 C20orf141Q9NUB4 165 aa5.38□□□□□ -1.55
CDC42BPA-201ENST00000334218 NYNRINQ9P2P1 1898 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms