RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TSTD3H0UI37 97 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 EDN3P14138 238 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 PKIAP61925 76 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 FOXO1Q12778 655 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 PNRC1Q12796 327 aaPredicted RBP20.24■□□□□ 0.83
TSKU-201ENST00000333090 OR8G1Q15617 311 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 CEACAM16Q2WEN9 425 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 CABLES2Q9BTV7 478 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 IL36RNQ9UBH0 155 aa20.24■□□□□ 0.83
TSKU-201ENST00000333090 TRAV1-1A0A0B4J248 108 aa20.23■□□□□ 0.83
TSKU-201ENST00000333090 A0A1W2PQM1 296 aa20.23■□□□□ 0.83
TSKU-201ENST00000333090 CISD1Q9NZ45 108 aaKnown RBP20.23■□□□□ 0.83
TSKU-201ENST00000333090 RND2P52198 227 aa20.23■□□□□ 0.83
TSKU-201ENST00000333090 AAED1Q7RTV5 226 aa20.23■□□□□ 0.83
TSKU-201ENST00000333090 OR5D13Q8NGL4 314 aa20.23■□□□□ 0.83
TSKU-201ENST00000333090 CPT1CQ8TCG5 803 aa20.23■□□□□ 0.83
TSKU-201ENST00000333090 HIST1H2BLQ99880 126 aa20.23■□□□□ 0.83
TSKU-201ENST00000333090 A0A087X0M5 115 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 A0A1B0GX30 115 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 ZNHIT1O43257 154 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 NAPSAO96009 420 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 SSTP61278 116 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 OR51H1Q8NH63 302 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 GTF3AQ92664 365 aaKnown RBP20.22■□□□□ 0.83
TSKU-201ENST00000333090 IGKV1-6A0A0C4DH72 117 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 IGHV5-10-1A0A0J9YXX1 117 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 SMCO3A2RU48 225 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 PGLYRP1O75594 196 aaPredicted RBP20.22■□□□□ 0.83
TSKU-201ENST00000333090 KRTAP27-1Q3LI81 207 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 RNASE11Q8TAA1 199 aaKnown RBP20.22■□□□□ 0.83
TSKU-201ENST00000333090 SF3B5Q9BWJ5 86 aaKnown RBP20.22■□□□□ 0.83
TSKU-201ENST00000333090 TMEM242Q9NWH2 141 aa20.22■□□□□ 0.83
TSKU-201ENST00000333090 H0Y980 276 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 TUSC2O75896 110 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 RAC3P60763 192 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 Q6ZS49 121 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 REC114Q7Z4M0 266 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 YRDCQ86U90 279 aaKnown RBP20.21■□□□□ 0.83
TSKU-201ENST00000333090 OR2V1Q8NHB1 315 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 SCGB1C1Q8TD33 95 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 CCL7P80098 99 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 ZFP36L1Q07352 338 aaKnown RBP20.21■□□□□ 0.83
TSKU-201ENST00000333090 MRPL14Q6P1L8 145 aaKnown RBP20.21■□□□□ 0.83
TSKU-201ENST00000333090 ZNF295-AS1Q8N0V1 137 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 GPR146Q96CH1 333 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 PCED1AQ9H1Q7 454 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 SDF2L1Q9HCN8 221 aa20.21■□□□□ 0.83
TSKU-201ENST00000333090 IL2RGP31785 369 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 ZNF726P1Q15940 193 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 CCDC74BQ96LY2 380 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 SMOC1Q9H4F8 434 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 CEP192Q8TEP8 1941 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 CARD18P57730 90 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 SSX7Q7RTT5 188 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 CA5BP1Q8WTZ4 195 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 TECTBQ96PL2 329 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 CACNA1EQ15878 2313 aa20.2■□□□□ 0.82
TSKU-201ENST00000333090 KIR2DS1A0A191URI9 304 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 CEBPZOSA8MTT3 80 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 SERPINE2P07093 398 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 F2RP25116 425 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 KIR2DS4P43632 304 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 SSR4P51571 173 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 GPM6AP51674 278 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 CLDN15P56746 228 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 KIR2DS1Q14954 304 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 PHOX2AO14813 284 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 CCNOP22674 350 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 CD81P60033 236 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 DNLZQ5SXM8 178 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 OR56B2PQ8NGI1 322 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 OCIAD1Q9NX40 245 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 PI4KAP42356 2102 aa20.19■□□□□ 0.82
TSKU-201ENST00000333090 TRBV24-1A0A075B6N3 115 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 GJE1A6NN92 205 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 TGOLN2O43493 480 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 CNOT4O95628 575 aaKnown RBP20.18■□□□□ 0.82
TSKU-201ENST00000333090 IGHV3-9P01782 118 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 METTL15P1P0C7V9 234 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 IAPPP10997 89 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 IL22RA2Q969J5 263 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 RCC1LQ96I51 464 aaKnown RBP20.18■□□□□ 0.82
TSKU-201ENST00000333090 PITPNC1Q9UKF7 332 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 KIAA1549Q9HCM3 1950 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 CXCL13O43927 109 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 OPN1MWP04001 364 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 OPN1MW2P0DN77 364 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 OPN1MW3P0DN78 364 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 PSG2P11465 335 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 ATP23Q9Y6H3 246 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 IGHV1-45A0A0A0MS14 117 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 ZNF716A6NP11 495 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 CBR3O75828 277 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 FGF12P61328 243 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 PCBD1P61457 104 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 CLN3Q13286 438 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 TRIM61Q5EBN2 209 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 RAB40CQ96S21 281 aa20.18■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A10PA6NDY2 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A18PA6NE21 464 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms