RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PCDH15Q96QU1 1955 aa20.98■□□□□ 0.95
SOX1-201ENST00000330949 CABIN1Q9Y6J0 2220 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 A0A0U1RQV5 110 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 A0A1W2PNV4 684 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 BATFQ16520 125 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 TBC1D26Q86UD7 250 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 VSIRQ9H7M9 311 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 DNAJC4Q9NNZ3 241 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 ALKBH4Q9NXW9 302 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 TMEM250H0YL14 139 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 MDH2P40926 338 aaKnown RBP20.97■□□□□ 0.95
SOX1-201ENST00000330949 GFERP55789 205 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 MFAP5Q13361 173 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 TMEM183BQ1AE95 376 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 TOMM20LQ6UXN7 152 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 NUFIP2Q7Z417 695 aaKnown RBP20.97■□□□□ 0.95
SOX1-201ENST00000330949 UNC13CQ8NB66 2214 aa20.97■□□□□ 0.95
SOX1-201ENST00000330949 SLC33A1O00400 549 aaPredicted RBP20.96■□□□□ 0.95
SOX1-201ENST00000330949 SERF2P84101 59 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 ENDOGQ14249 297 aaKnown RBP20.96■□□□□ 0.95
SOX1-201ENST00000330949 PRSS8Q16651 343 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 RPUSD4Q96CM3 377 aaKnown RBP20.96■□□□□ 0.95
SOX1-201ENST00000330949 C10orf35Q96D05 121 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 RNF115Q9Y4L5 304 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 C5orf63A6NC05 138 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 CTSSP25774 331 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 PAX9P55771 341 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 SMAD4Q13485 552 aaKnown RBP20.96■□□□□ 0.95
SOX1-201ENST00000330949 RTP5Q14D33 572 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 TEX43Q6ZNM6 134 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 SSX7Q7RTT5 188 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 DYRK2Q92630 601 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 BTF3L4Q96K17 158 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 GAL3ST2Q9H3Q3 398 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 LANCL2Q9NS86 450 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 KIR2DS5A0A0G2JLQ3 304 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 A0A0G2JNG1 304 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 KIR2DS3K7RE56 304 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 UBE2NP61088 152 aaKnown RBP20.96■□□□□ 0.95
SOX1-201ENST00000330949 KIR2DS5Q14953 304 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 Q6ZS52 159 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 ZNF160Q9HCG1 818 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 B3GAT1Q9P2W7 334 aa20.96■□□□□ 0.95
SOX1-201ENST00000330949 LIPT2A6NK58 231 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 IGHV4-34P06331 123 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 KCNMB1Q16558 191 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 PLPPR1Q8TBJ4 325 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 TMEM106BQ9NUM4 274 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 GNRHRP30968 328 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 OR8B8Q15620 311 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 C22orf15Q8WYQ4 148 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 PINX1Q96BK5 328 aaKnown RBP20.95■□□□□ 0.94
SOX1-201ENST00000330949 WWTR1Q9GZV5 400 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 ZNF581Q9P0T4 197 aa20.95■□□□□ 0.94
SOX1-201ENST00000330949 ANGPTL7O43827 346 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 SPIN3Q5JUX0 258 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 WDR5BQ86VZ2 330 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 TMEM256Q8N2U0 113 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 C11orf42Q8N5U0 333 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 CLEC1BQ9P126 229 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 MED12Q93074 2177 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 DMDP11532 3685 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 NXPH3O95157 252 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 RPP30P78346 268 aaKnown RBP20.94■□□□□ 0.94
SOX1-201ENST00000330949 SLC25A47Q6Q0C1 308 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 PLSCR2Q9NRY7 297 aa20.94■□□□□ 0.94
SOX1-201ENST00000330949 RAB7AP51149 207 aa20.93■□□□□ 0.94
SOX1-201ENST00000330949 TMEM41BQ5BJD5 291 aa20.93■□□□□ 0.94
SOX1-201ENST00000330949 PARLQ9H300 379 aa20.93■□□□□ 0.94
SOX1-201ENST00000330949 CD207Q9UJ71 328 aa20.93■□□□□ 0.94
SOX1-201ENST00000330949 TRAPPC1Q9Y5R8 145 aa20.93■□□□□ 0.94
SOX1-201ENST00000330949 YPEL5P62699 121 aa20.93■□□□□ 0.94
SOX1-201ENST00000330949 CST9LP1Q5W188 147 aa20.93■□□□□ 0.94
SOX1-201ENST00000330949 C20orf196Q8IYI0 205 aa20.93■□□□□ 0.94
SOX1-201ENST00000330949 ANKUB1A6NFN9 424 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 ITGB1BP1O14713 200 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 RBX1P62877 108 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 SSPNQ14714 243 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 SPSB1Q96BD6 273 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 VSTM2BA6NLU5 285 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 H3BML4 177 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 YPEL1O60688 119 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 SHISA6Q6ZSJ9 500 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 AGBL5Q8NDL9 886 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 LHX4Q969G2 390 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 IL22RA2Q969J5 263 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 YPEL2Q96QA6 119 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 REPIN1Q9BWE0 567 aaKnown RBP20.92■□□□□ 0.94
SOX1-201ENST00000330949 PLK3Q9H4B4 646 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 MSL2Q9HCI7 577 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 SPAG17Q6Q759 2223 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 RTTNQ86VV8 2226 aa20.92■□□□□ 0.94
SOX1-201ENST00000330949 SPTY2D1-AS1A0A0U1RR47 76 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 F5H5K5 113 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 H3BP45 60 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 TNFSF12O43508 249 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 TCN2P20062 427 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 PSMB3P49720 205 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 RPL15P61313 204 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms