RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FTH1P19P0C7X4 201 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 VDAC1P21796 283 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 NPBWR1P48145 328 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 ERVK11-1P61568 191 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 GUSBP1Q15486 140 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 GABRA6Q16445 453 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 CXorf66Q5JRM2 361 aaPredicted RBP12.36□□□□□ -0.43
TPM3-206ENST00000330188 TMEM88Q6PEY1 159 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 FAM214BQ7L5A3 538 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 PLPPR1Q8TBJ4 325 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 SLC25A40Q8TBP6 338 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 IL22RA2Q969J5 263 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
TPM3-206ENST00000330188 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 F2RP25116 425 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 CD80P33681 288 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 MDH2P40926 338 aaKnown RBP12.35□□□□□ -0.43
TPM3-206ENST00000330188 Q8IYB0 196 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 PARD6AQ9NPB6 346 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 ASCL3Q9NQ33 180 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 TREM2Q9NZC2 230 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 POLDIP2Q9Y2S7 368 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 SPAARA0A1B0GVQ0 90 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 IQCF6A8MYZ5 107 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 NPIPB11E5RHQ5 1161 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 SIRPB1O00241 398 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 SLC33A1O00400 549 aaPredicted RBP12.35□□□□□ -0.43
TPM3-206ENST00000330188 SSSCA1O60232 199 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 OR2H2O95918 312 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 PGA5P0DJD9 388 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 RAC2P15153 192 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 WT1P19544 449 aaPredicted RBP12.35□□□□□ -0.43
TPM3-206ENST00000330188 PVALBP20472 110 aaPredicted RBP12.35□□□□□ -0.43
TPM3-206ENST00000330188 ASCL1P50553 236 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 DVL1P1P54792 670 aaPredicted RBP12.35□□□□□ -0.43
TPM3-206ENST00000330188 ID3Q02535 119 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 ZNF154Q13106 437 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 MIDNQ504T8 468 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 DHRS7BQ6IAN0 325 aaPredicted RBP12.35□□□□□ -0.43
TPM3-206ENST00000330188 IGFL2Q6UWQ7 119 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 Q6ZT83 130 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 CBLN2Q8IUK8 224 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 HSD17B11Q8NBQ5 300 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 MAGT1Q9H0U3 335 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 LUZP4Q9P127 313 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 OR1A1Q9P1Q5 309 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 CACFD1Q9UGQ2 172 aa12.35□□□□□ -0.43
TPM3-206ENST00000330188 ERRFI1Q9UJM3 462 aaPredicted RBP12.35□□□□□ -0.43
TPM3-206ENST00000330188 TRAV39A0A0B4J263 110 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
TPM3-206ENST00000330188 H2AFB1P0C5Y9 115 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 SNCAP37840 140 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 UCP2P55851 309 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 PSG7Q13046 419 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 SHEQ5VZ18 495 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 INO80CQ6PI98 192 aaPredicted RBP12.34□□□□□ -0.43
TPM3-206ENST00000330188 ZNF497Q6ZNH5 498 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 MOB1BQ7L9L4 216 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 OR1J1Q8NGS3 322 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 IL1F10Q8WWZ1 152 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 LYRM2Q9NU23 88 aaPredicted RBP12.34□□□□□ -0.43
TPM3-206ENST00000330188 ATP6V1G2-DDX39BF2Z307 99 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 PITX3O75364 302 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 TSPAN15O95858 294 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 S100GP29377 79 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 FHITP49789 147 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 ZNF616Q08AN1 781 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 TMEM252Q8N6L7 170 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 OR10V1Q8NGI7 309 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 PLEKHF2Q9H8W4 249 aa12.34□□□□□ -0.43
TPM3-206ENST00000330188 A0A0G2JRQ6 117 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 H0YL77 283 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
TPM3-206ENST00000330188 CDIPTO14735 213 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 C1QL1O75973 258 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 TMEM50AO95807 157 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 IGLV2-14P01704 120 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 CTRB1P17538 263 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 MPV17P39210 176 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 CAMLGP49069 296 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 RAB5CP51148 216 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 ZNF146Q15072 292 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 CTRB2Q6GPI1 263 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 FAM122CQ6P4D5 195 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 COMMD1Q8N668 190 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 SCRT1Q9BWW7 348 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 SLC25A31Q9H0C2 315 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 C19orf12Q9NSK7 152 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 TAAR3PQ9P1P4 343 aa12.33□□□□□ -0.44
TPM3-206ENST00000330188 STRAPQ9Y3F4 350 aaKnown RBP12.33□□□□□ -0.44
TPM3-206ENST00000330188 IGHV3-64DA0A0J9YX35 117 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 PROB1E7EW31 1015 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 AQP7O14520 342 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 NXPH2O95156 264 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 WNT2P09544 360 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 MMP9P14780 707 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 LMO1P25800 156 aa12.32□□□□□ -0.44
TPM3-206ENST00000330188 KIR2DL2P43627 348 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms