RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 A6NLC8 198 aa17.13■□□□□ 0.33
RIPPLY3-201ENST00000329553 ZNF44P15621 663 aa17.13■□□□□ 0.33
RIPPLY3-201ENST00000329553 KLF3P57682 345 aaPredicted RBP17.13■□□□□ 0.33
RIPPLY3-201ENST00000329553 HOXA4Q00056 320 aaPredicted RBP17.13■□□□□ 0.33
RIPPLY3-201ENST00000329553 DEFA5Q01523 94 aa17.13■□□□□ 0.33
RIPPLY3-201ENST00000329553 IL15RAQ13261 267 aa17.13■□□□□ 0.33
RIPPLY3-201ENST00000329553 SURF2Q15527 256 aaPredicted RBP17.13■□□□□ 0.33
RIPPLY3-201ENST00000329553 POC1AQ8NBT0 407 aa17.13■□□□□ 0.33
RIPPLY3-201ENST00000329553 DPRXA6NFQ7 191 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 GLRA1P23415 457 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 DHRS11Q6UWP2 260 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 TMEM108Q6UXF1 575 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 C5orf24Q7Z6I8 188 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 OR10C1Q96KK4 312 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 HES4Q9HCC6 221 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 Q9N2K0 584 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 ZC4H2Q9NQZ6 224 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 OR5AC2Q9NZP5 309 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 IGLV3-9A0A075B6K5 115 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 MSGN1A6NI15 193 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 WNT9BO14905 357 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 ATXN7O15265 892 aaPredicted RBP17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 ZNF146Q15072 292 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 WDR82Q6UXN9 313 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 C2orf50Q96LR7 162 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 AQP10Q96PS8 301 aa17.12■□□□□ 0.33
RIPPLY3-201ENST00000329553 CACNA1AO00555 2505 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 OR2H2O95918 312 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 GLAP06280 429 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 PTAFRP25105 342 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 RBMXP38159 391 aaKnown RBP17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 BOLLQ8N9W6 283 aaKnown RBP17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 RNF141Q8WVD5 230 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 MRPL37Q9BZE1 423 aaKnown RBP17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 NKX6-2Q9C056 277 aaPredicted RBP17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 PRELID1Q9Y255 219 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 CHD3Q12873 2000 aaKnown RBP17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 MED19A0JLT2 244 aaPredicted RBP17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 TMEM218A2RU14 115 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 CCL21O00585 134 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 ATG12O94817 140 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 RPS23P62266 143 aaKnown RBP17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 C20orf204Q6ZNR8 217 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 Q6ZS49 121 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 NARS2Q96I59 477 aaKnown RBP17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 WFIKKN1Q96NZ8 548 aa17.11■□□□□ 0.33
RIPPLY3-201ENST00000329553 ICE1Q9Y2F5 2266 aa17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 SIRPB1O00241 398 aa17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 FAM157CP0CG43 387 aa17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 ARHGDIBP52566 201 aa17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 RBM39Q14498 530 aaKnown RBP17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 SRSF7Q16629 238 aaKnown RBP eCLIP17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 MRPL30Q8TCC3 161 aaKnown RBP17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 AIFM2Q9BRQ8 373 aa17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 METTL8Q9H825 291 aaKnown RBP17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 DECR2Q9NUI1 292 aa17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 TAAR3PQ9P1P4 343 aa17.1■□□□□ 0.33
RIPPLY3-201ENST00000329553 FAM74A7A6NL05 159 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 SLC33A1O00400 549 aaPredicted RBP17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 ABCD4O14678 606 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 SH2D1BO14796 132 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 SLC34A2O95436 690 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 SFTPCP11686 197 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 MZT1Q08AG7 82 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 FAM74A3Q4VXF1 159 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 IGSF11Q5DX21 431 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 NUP37Q8NFH4 326 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 DNAJB11Q9UBS4 358 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 FCGR2CP31995 323 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 CD200P41217 278 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 BSPH1Q075Z2 132 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 RAB32Q13637 225 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 SPRNQ5BIV9 151 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 SPIN3Q5JUX0 258 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 KDF1Q8NAX2 398 aaPredicted RBP17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 TMED6Q8WW62 240 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 RIMS4Q9H426 269 aaPredicted RBP17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 C1orf123Q9NWV4 160 aa17.09■□□□□ 0.33
RIPPLY3-201ENST00000329553 PLCE1Q9P212 2302 aa17.08■□□□□ 0.33
RIPPLY3-201ENST00000329553 NUDT19A8MXV4 375 aa17.08■□□□□ 0.33
RIPPLY3-201ENST00000329553 SCTP09683 121 aa17.08■□□□□ 0.33
RIPPLY3-201ENST00000329553 PET100P0DJ07 73 aa17.08■□□□□ 0.33
RIPPLY3-201ENST00000329553 CEBPDP49716 269 aaPredicted RBP17.08■□□□□ 0.33
RIPPLY3-201ENST00000329553 CLRN3Q8NCR9 226 aa17.08■□□□□ 0.33
RIPPLY3-201ENST00000329553 SLC5A7Q9GZV3 580 aa17.08■□□□□ 0.33
RIPPLY3-201ENST00000329553 OR14J1Q9UGF5 321 aa17.08■□□□□ 0.33
RIPPLY3-201ENST00000329553 SPRY3O43610 288 aa17.08■□□□□ 0.32
RIPPLY3-201ENST00000329553 HAND1O96004 215 aa17.08■□□□□ 0.32
RIPPLY3-201ENST00000329553 ECI1P42126 302 aa17.08■□□□□ 0.32
RIPPLY3-201ENST00000329553 ACP7Q6ZNF0 438 aa17.08■□□□□ 0.32
RIPPLY3-201ENST00000329553 SSX8Q7RTT4 187 aa17.08■□□□□ 0.32
RIPPLY3-201ENST00000329553 ARL11Q969Q4 196 aa17.08■□□□□ 0.32
RIPPLY3-201ENST00000329553 MRPL24Q96A35 216 aaKnown RBP17.08■□□□□ 0.32
RIPPLY3-201ENST00000329553 PTBP3O95758 552 aaKnown RBP17.07■□□□□ 0.32
RIPPLY3-201ENST00000329553 ADCYAP1P18509 176 aa17.07■□□□□ 0.32
RIPPLY3-201ENST00000329553 SELENOVP59797 346 aa17.07■□□□□ 0.32
RIPPLY3-201ENST00000329553 OR2V2Q96R30 315 aa17.07■□□□□ 0.32
RIPPLY3-201ENST00000329553 C14orf166Q9Y224 244 aaKnown RBP17.07■□□□□ 0.32
RIPPLY3-201ENST00000329553 ATP23Q9Y6H3 246 aa17.07■□□□□ 0.32
RIPPLY3-201ENST00000329553 ADGRG4Q8IZF6 3080 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms