RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 DUX4L3P0CJ86 424 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 DUX4L4P0CJ87 422 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 DUX4L5P0CJ88 424 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 DUX4L6P0CJ89 424 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 DUX4L7P0CJ90 424 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 PET100P0DJ07 73 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 CD37P11049 281 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 EIF2S3P41091 472 aaKnown RBP9.06□□□□□ -0.96
CUL4A-201ENST00000326335 NKX2-1P43699 371 aaPredicted RBP9.06□□□□□ -0.96
CUL4A-201ENST00000326335 ERVFRD-1P60508 538 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 LGI3Q8N145 548 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 OR52L2PQ8NGH6 319 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 OR1L1Q8NH94 360 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 KLF14Q8TD94 323 aaPredicted RBP9.06□□□□□ -0.96
CUL4A-201ENST00000326335 RNF141Q8WVD5 230 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
CUL4A-201ENST00000326335 ABHD14BQ96IU4 210 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 SLX1AQ9BQ83 275 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 FBLN5Q9UBX5 448 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 RPL36A-HNRNPH2H7BZ11 118 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 CYC1P08574 325 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 IL2RGP31785 369 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 SSTR5P35346 364 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 PPP1CCP36873 323 aaKnown RBP9.06□□□□□ -0.96
CUL4A-201ENST00000326335 FGF12P61328 243 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 TMEM187Q14656 261 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 FAM214BQ7L5A3 538 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 CMTM1Q8IZ96 169 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 BCL2L2Q92843 193 aaPredicted RBP9.06□□□□□ -0.96
CUL4A-201ENST00000326335 DHRS9Q9BPW9 319 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 SAV1Q9H4B6 383 aaPredicted RBP9.06□□□□□ -0.96
CUL4A-201ENST00000326335 RGCCQ9H4X1 137 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
CUL4A-201ENST00000326335 ACACBO00763 2458 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 ST8SIA3O43173 380 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 TSPAN15O95858 294 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 SNRNP70P08621 437 aaKnown RBP9.05□□□□□ -0.96
CUL4A-201ENST00000326335 FBP1P09467 338 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 UCP2P55851 309 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 MRPL49Q13405 166 aaKnown RBP9.05□□□□□ -0.96
CUL4A-201ENST00000326335 DAZAP2Q15038 168 aaPredicted RBP9.05□□□□□ -0.96
CUL4A-201ENST00000326335 ARL6IP1Q15041 203 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 HAGHQ16775 308 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 ZNF573Q86YE8 665 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 STOML3Q8TAV4 291 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 OR5P3Q8WZ94 311 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 ARL11Q969Q4 196 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 ISOC2Q96AB3 205 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 WFDC1Q9HC57 220 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 A0A0G2JRQ6 117 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 TM4SF5O14894 197 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 PSPNO60542 156 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 TPPPO94811 219 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 SLC25A4P12235 298 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 DEFA4P12838 97 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 CBR1P16152 277 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 ZP3P21754 424 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 MIDNQ504T8 468 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 FAM76BQ5HYJ3 339 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 CISD2Q8N5K1 135 aaKnown RBP9.05□□□□□ -0.96
CUL4A-201ENST00000326335 OR5C1Q8NGR4 320 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 RHOFQ9HBH0 211 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.05□□□□□ -0.962e-8■■■□□ 14.7
CUL4A-201ENST00000326335 MYO18BQ8IUG5 2567 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 ATP6V1G2-DDX39BF2Z307 99 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 CHST1O43916 411 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 SMPD2O60906 423 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 METTL15P1P0C7V9 234 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 MUC1P15941 1255 aaPredicted RBP9.05□□□□□ -0.96
CUL4A-201ENST00000326335 NAT1P18440 290 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 GCH1P30793 250 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 SPRNQ5BIV9 151 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 SPANXN5Q5MJ07 72 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 TMEM42Q69YG0 159 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 FAHD2BQ6P2I3 314 aaPredicted RBP9.05□□□□□ -0.96
CUL4A-201ENST00000326335 PUSL1Q8N0Z8 303 aaKnown RBP9.05□□□□□ -0.96
CUL4A-201ENST00000326335 FAHD2AQ96GK7 314 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 HINT2Q9BX68 163 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 PCDHB16Q9NRJ7 776 aa9.05□□□□□ -0.96
CUL4A-201ENST00000326335 IGKV3D-15A0A087WSY6 115 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 HOXD4P09016 255 aaPredicted RBP9.04□□□□□ -0.96
CUL4A-201ENST00000326335 CECR9P0C854 216 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 ELLP55199 621 aaPredicted RBP9.04□□□□□ -0.96
CUL4A-201ENST00000326335 FAM27E3Q08E93 113 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 FIP1L1Q6UN15 594 aaKnown RBP9.04□□□□□ -0.96
CUL4A-201ENST00000326335 ZNF107Q9UII5 783 aaPredicted RBP9.04□□□□□ -0.96
CUL4A-201ENST00000326335 C9JQL5 133 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 GLIPR1P48060 266 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 NPBWR1P48145 328 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 LDLRAD3Q86YD5 345 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 CCDC71LQ8N9Z2 235 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 RTL8AQ9BWD3 113 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 Q9N2K0 584 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 CACNG5Q9UF02 275 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 OR5H1A6NKK0 313 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 OPN1MWP04001 364 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 GLAP06280 429 aa9.04□□□□□ -0.96
CUL4A-201ENST00000326335 FGF2P09038 288 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms