RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 FAM106CPP0CH98 169 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 IGFBP3P17936 291 aaPredicted RBP9.75□□□□□ -0.85
TPM3-204ENST00000323144 C21orf33P30042 268 aaPredicted RBP9.75□□□□□ -0.85
TPM3-204ENST00000323144 BDKRB2P30411 391 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 KCNJ3P48549 501 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 RAB7AP51149 207 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 RPS11P62280 158 aaKnown RBP eCLIP9.75□□□□□ -0.85
TPM3-204ENST00000323144 ZNF816Q0VGE8 651 aaPredicted RBP9.75□□□□□ -0.85
TPM3-204ENST00000323144 RIPK1Q13546 671 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 SLC22A6Q4U2R8 563 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 KLHL22Q53GT1 634 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 LCNL1Q6ZST4 164 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 MRPL41Q8IXM3 137 aaKnown RBP9.75□□□□□ -0.85
TPM3-204ENST00000323144 IZUMO1Q8IYV9 350 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 KLHL30-AS1Q8NEE0 82 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 OR52N1Q8NH53 320 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 NEK7Q8TDX7 302 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 MUL1Q969V5 352 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 RCC1LQ96I51 464 aaKnown RBP9.75□□□□□ -0.85
TPM3-204ENST00000323144 DUX3Q96PT4 197 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 OR14A2Q96R54 314 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 MYCBPQ99417 103 aaPredicted RBP9.75□□□□□ -0.85
TPM3-204ENST00000323144 BARHL1Q9BZE3 327 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 METTL9Q9H1A3 318 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 NCOR1P1Q9H4R4 102 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 TMEM138Q9NPI0 162 aa9.75□□□□□ -0.85
TPM3-204ENST00000323144 DIMT1Q9UNQ2 313 aaKnown RBP9.75□□□□□ -0.85
TPM3-204ENST00000323144 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 LINC01548A6NM66 108 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 SERPINE3A8MV23 424 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 NUDT19A8MXV4 375 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 CCRL2O00421 344 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 FGF16O43320 207 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 BAG2O95816 211 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 FSTP19883 344 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 LRRC36Q1X8D7 754 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 MPV17LQ2QL34 196 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 DEFB136Q30KP8 78 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 CCDC58Q4VC31 144 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 ATAD3CQ5T2N8 411 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 DMKNQ6E0U4 476 aaPredicted RBP9.74□□□□□ -0.85
TPM3-204ENST00000323144 ZNF497Q6ZNH5 498 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 SLC35E3Q7Z769 313 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 Q8N6K4 173 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 ZNF565Q8N9K5 539 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 ZNF485Q8NCK3 441 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 TMEM104Q8NE00 496 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 ZNF555Q8NEP9 628 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 HAVCR2Q8TDQ0 301 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 CYGBQ8WWM9 190 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 GFOD1Q9NXC2 390 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 RCC2Q9P258 522 aaKnown RBP9.74□□□□□ -0.85
TPM3-204ENST00000323144 ZNF281Q9Y2X9 895 aa9.74□□□□□ -0.85
TPM3-204ENST00000323144 EXOSC1Q9Y3B2 195 aaKnown RBP9.74□□□□□ -0.85
TPM3-204ENST00000323144 ZNF736B4DX44 427 aaPredicted RBP9.73□□□□□ -0.85
TPM3-204ENST00000323144 C12orf77C9JDV5 145 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 H3BUI4 141 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 AIPO00170 330 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 OGG1O15527 345 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 CSTBP04080 98 aaKnown RBP9.73□□□□□ -0.85
TPM3-204ENST00000323144 MYL12AP19105 171 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 DCKP27707 260 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 THBS3P49746 956 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 GNMTQ14749 295 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 TMPRSS11AQ6ZMR5 421 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 MOB3BQ86TA1 216 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 LINC00596Q86U02 117 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 THNSL2Q86YJ6 484 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 STPG2Q8N412 459 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 ZNF439Q8NDP4 499 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 OR10A7Q8NGE5 316 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 OR10V1Q8NGI7 309 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 CHPT1Q8WUD6 406 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 RTN4IP1Q8WWV3 396 aaPredicted RBP9.73□□□□□ -0.85
TPM3-204ENST00000323144 GHSRQ92847 366 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 ARL11Q969Q4 196 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 EAF1Q96JC9 268 aaPredicted RBP9.73□□□□□ -0.85
TPM3-204ENST00000323144 RDH12Q96NR8 316 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 HSPB9Q9BQS6 159 aa9.73□□□□□ -0.85
TPM3-204ENST00000323144 MRPS28Q9Y2Q9 187 aaKnown RBP9.73□□□□□ -0.85
TPM3-204ENST00000323144 TRBV5-7A0A0A0MS05 114 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 A0A1W2PPK0 400 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 IGHG2P01859 326 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 GPR12P47775 334 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 EGFEM1PQ0D2K5 195 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 Q499Y3 187 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 LAIR2Q6ISS4 152 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 C5orf24Q7Z6I8 188 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 PRR18Q8N4B5 295 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 JAGN1Q8N5M9 183 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 Q8N9W7 124 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 OR4K15Q8NH41 348 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 OR1L1Q8NH94 360 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 ST6GALNAC6Q969X2 333 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 BANF2Q9H503 90 aa9.72□□□□□ -0.85
TPM3-204ENST00000323144 MT-ND4P03905 459 aa9.71□□□□□ -0.86
TPM3-204ENST00000323144 RPLP1P05386 114 aaKnown RBP9.71□□□□□ -0.86
TPM3-204ENST00000323144 GNAO1P09471 354 aa9.71□□□□□ -0.86
TPM3-204ENST00000323144 VHLP40337 213 aa9.71□□□□□ -0.86
TPM3-204ENST00000323144 LUMP51884 338 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms