RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 OR52B4Q8NGK2 314 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 SLC7A10Q9NS82 523 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 RPS4Y1P22090 263 aaKnown RBP8.65□□□□□ -1.02
COL12A1-201ENST00000322507 TIMM23BQ5SRD1 257 aa8.65□□□□□ -1.02
COL12A1-201ENST00000322507 GPX5O75715 221 aa8.65□□□□□ -1.03
COL12A1-201ENST00000322507 RSPO2Q6UXX9 243 aaPredicted RBP8.65□□□□□ -1.03
COL12A1-201ENST00000322507 NKAIN4Q8IVV8 208 aa8.65□□□□□ -1.03
COL12A1-201ENST00000322507 CLEC2DQ9UHP7 191 aa8.65□□□□□ -1.03
COL12A1-201ENST00000322507 MEX3AA1L020 520 aaKnown RBP8.64□□□□□ -1.03
COL12A1-201ENST00000322507 CCSMST1Q4G0I0 132 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF502Q8TBZ5 544 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 AMY1AP04745 511 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 FUT3P21217 361 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 SPRED3Q2MJR0 410 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 VMA21Q3ZAQ7 101 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 LINC00596Q86U02 117 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 MARCH3Q86UD3 253 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 ST3GAL6Q9Y274 331 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.64□□□□□ -1.03
COL12A1-201ENST00000322507 SRFP11831 508 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 VPREB1P12018 145 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 SPEM2Q0P670 501 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 CYSLTR2Q9NS75 346 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 CES1P1Q9UKY3 287 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 LEPROTL1O95214 131 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 OR2V2Q96R30 315 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 FAM117AQ9C073 453 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 OR51H1Q8NH63 302 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 YIPF6Q96EC8 236 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 C20orf27Q9GZN8 174 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 NRSN2Q9GZP1 204 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 GREB1Q4ZG55 1949 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 J3QR06 171 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 PAPPA-AS1Q5QFB9 102 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 PIGTQ969N2 578 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 PSME4Q14997 1843 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 A8MWV9 139 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 K7EQS6 105 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 ZBTB34Q8NCN2 500 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 ATP6V0CP27449 155 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 CALHM3Q86XJ0 350 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 PCGF1Q9BSM1 259 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 CACNA1BQ00975 2339 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 SNURFLB1AK76 121 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 KLKB1P03952 638 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 DNM1P46Q6ZS02 220 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 DOK4Q8TEW6 326 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 DIRC2Q96SL1 478 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 RAXQ9Y2V3 346 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 HCFC1P51610 2035 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 LMO7DNF2Z398 122 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 GOSR1O95249 250 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 RNASE1P07998 156 aaKnown RBP8.64□□□□□ -1.03
COL12A1-201ENST00000322507 IER3P46695 156 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 GAGE13Q4V321 117 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 TCTN3Q6NUS6 607 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 SCCPDHQ8NBX0 429 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 VSTM2AQ8TAG5 236 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 ZMIZ1Q9ULJ6 1067 aa8.64□□□□□ -1.03
COL12A1-201ENST00000322507 COL18A1P39060 1754 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 A0A1W2PR48 441 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 CD40P25942 277 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 CAMPP49913 170 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 PTCRAQ6ISU1 281 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 MEX3DQ86XN8 651 aaKnown RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 ISOC2Q96AB3 205 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 GRAMD2BQ96HH9 432 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 GLI3P10071 1580 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 C5orf49A4QMS7 147 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 F5H697 171 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 SBF1O95248 1867 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 RBP4P02753 201 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 LGALS1P09382 135 aaKnown RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 GALNSP34059 522 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 SDK2Q58EX2 2172 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 C5orf17Q8NAS9 161 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 V9GYY9 64 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 RER1O15258 196 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 CD74P04233 296 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 SKP2Q13309 424 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 OTOSQ8NHW6 89 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 HINT3Q9NQE9 182 aaKnown RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 PLPP2O43688 288 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 GRPP07492 148 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF766Q5HY98 468 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 ATOH1Q92858 354 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 MYOZ1Q9NP98 299 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 RABAC1Q9UI14 185 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 MKRN2OSH3BPM6 223 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 SPINK8P0C7L1 97 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 GNG3P63215 75 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 PDPNQ86YL7 162 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 NOXO1Q8NFA2 376 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 J3KT08 172 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 MARVELD1Q9BSK0 173 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 SOCS7O14512 581 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 RIMKLAQ8IXN7 391 aa8.63□□□□□ -1.03
COL12A1-201ENST00000322507 PHLDA1Q8WV24 401 aaPredicted RBP8.63□□□□□ -1.03
COL12A1-201ENST00000322507 MAGT1Q9H0U3 335 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms