RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SUMF1Q8NBK3 374 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 HSD17B11Q8NBQ5 300 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 SSSCA1O60232 199 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 SMPD2O60906 423 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 TNFSF10P50591 281 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 PPP1CBP62140 327 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 BAXQ07812 192 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 TRIP6Q15654 476 aaKnown RBP19.01■□□□□ 0.63
PNKP-201ENST00000322344 PRELID1Q9Y255 219 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 C9JQL5 133 aa19■□□□□ 0.63
PNKP-201ENST00000322344 SLC25A6P12236 298 aa19■□□□□ 0.63
PNKP-201ENST00000322344 GUK1Q16774 197 aa19■□□□□ 0.63
PNKP-201ENST00000322344 TMEM252Q8N6L7 170 aa19■□□□□ 0.63
PNKP-201ENST00000322344 LFNGQ8NES3 379 aa19■□□□□ 0.63
PNKP-201ENST00000322344 PARP12Q9H0J9 701 aaKnown RBP19■□□□□ 0.63
PNKP-201ENST00000322344 SH3BGRL3Q9H299 93 aa19■□□□□ 0.63
PNKP-201ENST00000322344 CXorf66Q5JRM2 361 aaPredicted RBP19■□□□□ 0.63
PNKP-201ENST00000322344 OR10V1Q8NGI7 309 aa19■□□□□ 0.63
PNKP-201ENST00000322344 DMDP11532 3685 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 HSPA12AO43301 675 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 IGHG3P01860 377 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 RAC2P15153 192 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 SELEP16581 610 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 LMO1P25800 156 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 ERVK11-1P61568 191 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 GABRA6Q16445 453 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 KDF1Q8NAX2 398 aaPredicted RBP18.99■□□□□ 0.63
PNKP-201ENST00000322344 PLPPR1Q8TBJ4 325 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 CLCF1Q9UBD9 225 aa18.99■□□□□ 0.63
PNKP-201ENST00000322344 ERRFI1Q9UJM3 462 aaPredicted RBP18.99■□□□□ 0.63
PNKP-201ENST00000322344 UMAD1C9J7I0 102 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 K7N7A8 449 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 INO80CQ6PI98 192 aaPredicted RBP18.98■□□□□ 0.63
PNKP-201ENST00000322344 SCCPDHQ8NBX0 429 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 GPHA2Q96T91 129 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 PBDC1Q9BVG4 233 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 PRELID3BQ9Y3B1 194 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 ZNF407Q9C0G0 2248 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 WRBO00258 174 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 HOXB1P14653 301 aaPredicted RBP18.98■□□□□ 0.63
PNKP-201ENST00000322344 IGHV1-2P23083 117 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 ZNF497Q6ZNH5 498 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 TMPRSS7Q7RTY8 843 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 WDR86Q86TI4 376 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 AKR1E2Q96JD6 320 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 SCRT1Q9BWW7 348 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 OR2J1Q9GZK6 312 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 MAGT1Q9H0U3 335 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 MED13Q9UHV7 2174 aa18.98■□□□□ 0.63
PNKP-201ENST00000322344 A0A1B0GU03 582 aa18.97■□□□□ 0.63
PNKP-201ENST00000322344 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.97■□□□□ 0.63
PNKP-201ENST00000322344 TNFSF12O43508 249 aa18.97■□□□□ 0.63
PNKP-201ENST00000322344 SERPINE2P07093 398 aa18.97■□□□□ 0.63
PNKP-201ENST00000322344 PPT1P50897 306 aa18.97■□□□□ 0.63
PNKP-201ENST00000322344 IDH3GP51553 393 aaPredicted RBP18.97■□□□□ 0.63
PNKP-201ENST00000322344 CLINT1Q14677 625 aa18.97■□□□□ 0.63
PNKP-201ENST00000322344 OR8G1Q15617 311 aa18.97■□□□□ 0.63
PNKP-201ENST00000322344 TMEM182Q6ZP80 229 aaPredicted RBP18.97■□□□□ 0.63
PNKP-201ENST00000322344 MLXQ9UH92 298 aa18.97■□□□□ 0.63
PNKP-201ENST00000322344 A0A1B0GW64 132 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 TMEM210A6NLX4 147 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 IQCF6A8MYZ5 107 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 PROB1E7EW31 1015 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 SLC33A1O00400 549 aaPredicted RBP18.96■□□□□ 0.63
PNKP-201ENST00000322344 CNOT4O95628 575 aaKnown RBP18.96■□□□□ 0.63
PNKP-201ENST00000322344 OR2H2O95918 312 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 CELA3BP08861 270 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 PGA5P0DJD9 388 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 MYPOPQ86VE0 399 aaPredicted RBP18.96■□□□□ 0.63
PNKP-201ENST00000322344 OR8G5Q8NG78 346 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 SPINK2P20155 84 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 ATP6V0CP27449 155 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 FHITP49789 147 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 ZNF146Q15072 292 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 FAM214BQ7L5A3 538 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 OR10Z1Q8NGY1 313 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 OR2G3Q8NGZ4 309 aa18.96■□□□□ 0.63
PNKP-201ENST00000322344 GNPNAT1Q96EK6 184 aaPredicted RBP18.96■□□□□ 0.63
PNKP-201ENST00000322344 EIF5A2Q9GZV4 153 aaKnown RBP18.96■□□□□ 0.63
PNKP-201ENST00000322344 SIRPB1O00241 398 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 SH2D1BO14796 132 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 ACAA1P09110 424 aaPredicted RBP18.95■□□□□ 0.62
PNKP-201ENST00000322344 NFYBP25208 207 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 ASCL1P50553 236 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 PMP22Q01453 160 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 Q6ZT83 130 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 VASH2Q86V25 355 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 OR5C1Q8NGR4 320 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 FAM213BQ8TBF2 198 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 SLC25A40Q8TBP6 338 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 IL1F10Q8WWZ1 152 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 SMDT1Q9H4I9 107 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 SMCO4Q9NRQ5 59 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 TAAR3PQ9P1P4 343 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 TRAPPC2LQ9UL33 140 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 RNF115Q9Y4L5 304 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 CHST1O43916 411 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 C1QL1O75973 258 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 NXPH2O95156 264 aa18.95■□□□□ 0.62
PNKP-201ENST00000322344 FIP1L1Q6UN15 594 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms