RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 LDLRAD3Q86YD5 345 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 OR8H3Q8N146 312 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 CD177Q8N6Q3 437 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 BHLHE23Q8NDY6 225 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 OR51D1Q8NGF3 324 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 OR8H1Q8NGG4 311 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 MRPL30Q8TCC3 161 aaKnown RBP2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 GIMAP1Q8WWP7 306 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 FAHD2AQ96GK7 314 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 EAF1Q96JC9 268 aaPredicted RBP2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 CMSS1Q9BQ75 279 aaKnown RBP2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 SHARPINQ9H0F6 387 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 ATG5Q9H1Y0 275 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 OR51B6Q9H340 312 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 NECAP2Q9NVZ3 263 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 IDI2-AS1Q9NZ38 188 aa2.72□□□□□ -1.97
SCAMP1-201ENST00000320280 CCDC160A6NGH7 325 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 FAM90A9PA6NNJ1 464 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 CLDN34H7C241 214 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ATG12O94817 140 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 PLA2G1BP04054 148 aaKnown RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 FCGR3AP08637 254 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ZNF728P0DKX0 622 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ANOS1P23352 680 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 CDKN1AP38936 164 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 UBE2E1P51965 193 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 TAS2R31P59538 309 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 MPPED2Q15777 294 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ODF4Q2M2E3 257 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 KRBOX4Q5JUW0 171 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 HES5Q5TA89 166 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 NR2C2APQ86WQ0 139 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SAMD12Q8N8I0 201 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ZDHHC22Q8N966 263 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 CCL17Q92583 94 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 PRRT1Q99946 306 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SLC25A21Q9BQT8 299 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RSRP1Q9BUV0 290 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SIRPDQ9H106 197 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 PPP1R3EQ9H7J1 279 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RAB18Q9NP72 206 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RBFOX1Q9NWB1 397 aaKnown RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 PIPOXQ9P0Z9 390 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 KCNS2Q9ULS6 477 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 FZR1Q9UM11 496 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 DMXL2Q8TDJ6 3036 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 A0A0C4DFX4 3053 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 TRBV6-7A0A0A0MS04 114 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RFPL4AA6NLU0 287 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 CENPXA8MT69 81 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ODF3BA8MYP8 253 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 DISC1C4P0D8 188 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RFPL4AL1F8VTS6 287 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 DVL1O14640 695 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RBFOX2O43251 390 aaKnown RBP eCLIP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SPRY1O43609 319 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SSX4O60224 188 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RHBDL1O75783 438 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 OR7C1O76099 320 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SPDEFO95238 335 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 CYB5R3P00387 301 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 AKAIN1P0CW23 69 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ZNF44P15621 663 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RPA2P15927 270 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 RFX2P48378 723 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 MECP2P51608 486 aaKnown RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 OR10A3P58181 314 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 DEFA1P59665 94 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 DEFA3P59666 94 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SRPXP78539 464 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 LSAMPQ13449 338 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 HABP2Q14520 560 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 FAM27D1Q5T7N8 215 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SIGIRRQ6IA17 410 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 DHRS11Q6UWP2 260 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ZNF66Q6ZN08 573 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 IZUMO1Q8IYV9 350 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 CD300LFQ8TDQ1 290 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 TMEM186Q96B77 213 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 GALMQ96C23 342 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 AJUBAQ96IF1 538 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 BPESC1Q9GZL8 116 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 IFT46Q9NQC8 304 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 EXTL2Q9UBQ6 330 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 N6AMT1Q9Y5N5 214 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 POMT1Q9Y6A1 747 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 DIDO1Q9BTC0 2240 aaKnown RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ANKRD20A5PA0PJZ0 165 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 VGLL3A8MV65 326 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 FAM25AB3EWG3 89 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 FAM25CB3EWG5 89 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 FAM25GB3EWG6 89 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 C15orf65H3BRN8 121 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 GEMIN2O14893 280 aaKnown RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 CREBL2O60519 120 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 TUSC2O75896 110 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 SNAPC5O75971 98 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 IGHV4-31P0DP07 118 aa2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ZNF16P17020 682 aaPredicted RBP2.71□□□□□ -1.98
SCAMP1-201ENST00000320280 ZBTB25P24278 435 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms